Gene Vapar_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3664 
Symbol 
ID7973897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp3865571 
End bp3866011 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID644794249 
ProductPeroxiredoxin 
Protein accessionYP_002945547 
Protein GI239816637 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03562] peroxiredoxin, OsmC subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.444391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAG ACAAGCACGC AAGCGTTCAC TGGGAAGGCG CCGGCAAGAC CGGCAAGGGC 
CAGGTCAGCA CCGAGACCGG CGCCCTCAAG GACTATCCCT ACGGCTTCGC CAGCCGCTTC 
GAGGACGACA AGCGCGGCAC CAACCCCGAG GAGATCGTCG GCGCGGCCCA TGCGGCCTGC 
TTCACGATGG CCTTTGCCTT CGCGCTGGAG AAGGAAGGCC TGACGGCCAC CCGCATCGAC 
ACCAAGGCCG CGGTGCGGCT GGCCAAGGAC GGCGAAGGCT TCAAGATCGA CCGCATCGCA 
CTCGAGCTCG ACGCCGCCGT GCCCAATCTG GAAGAAGCGA AGTTCCAGCA GATCGCGGCC 
GCCGCCAAGG CCGGCTGCCC GCTGTCGAAG GCACTGGCCA GCGTGCCGGA AATCACGCTG 
AAGGCGACGC TCGCCGGTTG A
 
Protein sequence
MAADKHASVH WEGAGKTGKG QVSTETGALK DYPYGFASRF EDDKRGTNPE EIVGAAHAAC 
FTMAFAFALE KEGLTATRID TKAAVRLAKD GEGFKIDRIA LELDAAVPNL EEAKFQQIAA 
AAKAGCPLSK ALASVPEITL KATLAG