| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3661 |
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| Symbol | |
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| ID | 7973894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3861685 |
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| End bp | 3863031 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794246 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002945544 |
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| Protein GI | 239816634 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.675312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGA CCAACGCCTC CGCCCGCCCC CATGTCGTCA TCGTCGGCTG CGGATTCGGC
GGACTCGAAG CCGCCCGCCG GCTCGAACGC GCCGACGTGG ACGTGACGGT GATCGAAAAG
ACCAACCACC ACCTGTTCCA GCCGCTGCTC TACCAGGTGG CGACCGCCGG GCTCGCTGCG
CCGTCGATCG CGGCGCCGGT GCGTGCCCTG TTCCGCGCGC AGCCGCGCAT CACCACGCTG
CTCGGCGAAG TGAGTGCCAT CGATCCGGCC GCGCGCGCGC TCCGGCTGGC CAACGGCAGC
CTGGTGAGCT ACGACCACCT GGTGGTCGCG GCCGGCGCGG CCCACAGCTA TTTCGGCCAT
GACGAATGGG CGCCCCTGGC GCCGGGCCTC AAGACGCTGT CGGACGCCTT CGAGATCCGC
CGCCGCGTGC TGATGTCCTA CGAAGCGGCC GAAACCGCCA CCGACCCCGA GCGCCGCCGC
GCCCTGCTCA CCTTCGTGGT GATCGGCGCC GGCCCCACGG GGGTCGAGAT GGCCGGCACG
CTGGCCGAGA TCGCCAAGCA CACGCTCTCC GGCGAATTCC GCCGCATCGA TCCGGGGAGC
GCACAGGTGC TGCTCGTCGA GGGCGGGCCG CGCGTGCTGC AGGCCATGCC CGAGAGCCTG
AGCCAGAAGG CGCTGGAGCA GCTCCAGCGG CTGGGCGTCG AGGTGCGGCT CAATGCACGC
GTGACCGCCA TCGACGCCAC CGGCCTCGAA GTGGAAGCCG GCGGCGGTGC CAGCGGCGCT
CCGGCCACCA GCTACCGCAT CGACAGCAGC TGCGTGGTGT GGGCGGCGGG CGTGGCGGCA
TCGCCGCTCG GACGCATGCT GGGCGAGGCG ACCGGCGCCG AATGCGACCG CGCGGGCCGC
ATCAAGGTCG AGCCCGACCT GAGCCTGCCG GGCCATCCCG AGATCAGCGT GGTGGGCGAC
CTGGCCGCGG CCCTGAGCTA CGCCCCCGGC AAGCCGCCCA AGCCGGTGCC CGGCGTGTCG
CCCGGCGCCA AGCAGATGGG CCGCGCGGCG GCCGCCAACA TTCTTCGCCG CATCGCGGGC
GTGCCGACCG TGCCTTTCCG CTACCGGGAC TACGGCAACC TGGCCACCAT CGGCCGCAAT
TCGGCGGTGG TCGACCTGGA AACGCCCTTG GGACCGCTGC GCTTCAGCGG CCGGCTCGCG
TGGCTGTTCT GGCTGTTCGC GCACGCGTAC TTCCTGATCG GGTTCCGCAA CCGCATCGTG
GTGCTGATGG ACTGGGCCAG CGCCTACTGG AGCTTCCAGC GCAATGCGCG CGTGGTGGCG
GACGTGCGGG GCAAGAGCGA GTCGTAG
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| Protein sequence | MQTTNASARP HVVIVGCGFG GLEAARRLER ADVDVTVIEK TNHHLFQPLL YQVATAGLAA
PSIAAPVRAL FRAQPRITTL LGEVSAIDPA ARALRLANGS LVSYDHLVVA AGAAHSYFGH
DEWAPLAPGL KTLSDAFEIR RRVLMSYEAA ETATDPERRR ALLTFVVIGA GPTGVEMAGT
LAEIAKHTLS GEFRRIDPGS AQVLLVEGGP RVLQAMPESL SQKALEQLQR LGVEVRLNAR
VTAIDATGLE VEAGGGASGA PATSYRIDSS CVVWAAGVAA SPLGRMLGEA TGAECDRAGR
IKVEPDLSLP GHPEISVVGD LAAALSYAPG KPPKPVPGVS PGAKQMGRAA AANILRRIAG
VPTVPFRYRD YGNLATIGRN SAVVDLETPL GPLRFSGRLA WLFWLFAHAY FLIGFRNRIV
VLMDWASAYW SFQRNARVVA DVRGKSES
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