| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3655 |
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| Symbol | |
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| ID | 7973888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3856086 |
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| End bp | 3856529 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794240 |
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| Product | UspA domain protein |
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| Protein accession | YP_002945538 |
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| Protein GI | 239816628 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.850888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCAATC ACATCCTGGT TCCGATCGAC GGCTCCGAAA CTTCCATGCT CGCGGTCAGC
AAGGCCAGCG GCCTGGCGCT GGCGTTCGGA AGCCGCATCA CGTTGATCCA CGTGATCGAC
AACTATCCCT TCATCGGCGT GGGTGCGGAC TATGCGCTGG GCCAGAACGA ATACCTGGCC
GCAGCCACCG CGAGCGCGAA TGCGGCGCTC GCCCGCGGCG TGGCGGCGCT CGCCGCCGAG
GGCCTGCACA GCGACCAGCG CGTGATCGAC GGCCACGTGG TGCACGAAGG CATCGTCGAC
ACCGCCATTG CCATTGCGGC CGACCTGATC GTGATGGGCT CGCACGGGCG CAGCGGCATC
GAGAAGCTGC TGCTGGGCAG CGTCACGCAG CGCGTGCTGC AGGACGCGCC CATGCCGGTG
CTCGTGGTCA AGGGCGGGCT GTAA
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| Protein sequence | MFNHILVPID GSETSMLAVS KASGLALAFG SRITLIHVID NYPFIGVGAD YALGQNEYLA
AATASANAAL ARGVAALAAE GLHSDQRVID GHVVHEGIVD TAIAIAADLI VMGSHGRSGI
EKLLLGSVTQ RVLQDAPMPV LVVKGGL
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