Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3631 |
Symbol | |
ID | 7970706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3839929 |
End bp | 3840357 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644794216 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_002945514 |
Protein GI | 239816604 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCG TCTCCGAACT GCTCAAGCGC CACGATTCCG CGGCCTGGCG CACCTCGCCC GACACCAGCG TGTTCGATGC GCTGGCCACC CTGGCGCGCT TCGAGGTGGG CGCGCTGATG GTGATGGACG GCGACCGGCT GGTGGGCTTC CTGTCCGAGC GCGACTACAC CCGCAAGGTG GCGCTGCAGG GCAAGAACTC CAAGGAGATG AAGGTCTCCG AGATCATGAC GCCCGACGTG ATGACCGTGA CCCCGCAGAC CCGCACGCGC GCCTGCATGG CGCTGATGAG CCAGCGCAAG TTCCGCCACC TGCCGGTGGT CGACGGCGCC AAGGTGGTGG GCATGATCTC CATCCAGGAC CTGATGGACG ACATCATTGC CGACCACGAG GAAACCATCG CCCAGCTCAC GACCTATATC CAGAGCTGA
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Protein sequence | MKPVSELLKR HDSAAWRTSP DTSVFDALAT LARFEVGALM VMDGDRLVGF LSERDYTRKV ALQGKNSKEM KVSEIMTPDV MTVTPQTRTR ACMALMSQRK FRHLPVVDGA KVVGMISIQD LMDDIIADHE ETIAQLTTYI QS
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