Gene Vapar_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3631 
Symbol 
ID7970706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3839929 
End bp3840357 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID644794216 
Productputative signal transduction protein with CBS domains 
Protein accessionYP_002945514 
Protein GI239816604 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCG TCTCCGAACT GCTCAAGCGC CACGATTCCG CGGCCTGGCG CACCTCGCCC 
GACACCAGCG TGTTCGATGC GCTGGCCACC CTGGCGCGCT TCGAGGTGGG CGCGCTGATG
GTGATGGACG GCGACCGGCT GGTGGGCTTC CTGTCCGAGC GCGACTACAC CCGCAAGGTG
GCGCTGCAGG GCAAGAACTC CAAGGAGATG AAGGTCTCCG AGATCATGAC GCCCGACGTG
ATGACCGTGA CCCCGCAGAC CCGCACGCGC GCCTGCATGG CGCTGATGAG CCAGCGCAAG
TTCCGCCACC TGCCGGTGGT CGACGGCGCC AAGGTGGTGG GCATGATCTC CATCCAGGAC
CTGATGGACG ACATCATTGC CGACCACGAG GAAACCATCG CCCAGCTCAC GACCTATATC
CAGAGCTGA
 
Protein sequence
MKPVSELLKR HDSAAWRTSP DTSVFDALAT LARFEVGALM VMDGDRLVGF LSERDYTRKV 
ALQGKNSKEM KVSEIMTPDV MTVTPQTRTR ACMALMSQRK FRHLPVVDGA KVVGMISIQD
LMDDIIADHE ETIAQLTTYI QS