| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3589 |
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| Symbol | |
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| ID | 7970664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3791082 |
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| End bp | 3793739 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794174 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_002945472 |
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| Protein GI | 239816562 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACGA CGACCGCGCA ACCCTCCCCC TCCACCAGCG ACTTCTCCGG GCATACGCCC
ATGATGGCGC AGTACCTGGG CCTCAAGGCG AACCATCCGG ACACCCTGCT GTTCTACCGG
ATGGGCGATT TCTACGAGCT GTTCTGGGCC GACGCCGAAA AGGCCGCGCG CCTGCTCGAC
ATCACGCTCA CCCAGCGCGG CCAGTCGGCC GGCCAGCCCG TGGTGATGTG CGGCGTGCCC
TTCCATGCGG TCGACACCTA TCTTGCGCGG CTCATCAAGC TGGGCGAATC GGTGGCCATC
TGCGAGCAGG TGGGCGAAGT CGGCGCGAGC AAGGGCCCGG TCGAGCGCAA GGTGGTGCGG
GTGGTCACGC CCGGCACGCT GACCGATTCG GAACTGCTCA ACGACAAGAG CGAATCGCTG
CTGCTCGCAG TGCATGCGGG CACGCGCAAC TTCTGCGGCC TGGCCTGGCT CAGCGTGACC
GGCGCGGAGC TGCGGCTGGC CGAATGCCCG GCCGATGCGC TCGAAGCCTG GATCGCGCGC
ATCGCGCCGA GCGAGCTGCT CTACAGCGCC GAGGTGACGC CGGCCTTCGA GCAGCGCCTG
AAGGCCGCGC GCGCGGCCAC GCCCTTCACG CTCTCGATCC GCCCCGCGTG GCAGTTCGAC
GGCGGCCTGG GCGAGCGCAA GCTCAGCGAG CAGATGGGCA GCAACAGCCT CGCGGCCTGG
AACGCCGAAT CGCTCGCCAA CGCGCATGCC GCCGCGGCCG CGCTGCTGGG CTATGCCGAG
CACACGCAGG GCCGCGCGCT GTCGCATGTG CAGCGCCTGT CGGTGGAGCG CGACGGCGAC
CTGGTCGAGT TGCCGCCCAC CACGCGGCGC AACCTCGAAC TGGTGCAGAC ATTGCGCGGC
GAAGACTCGC CCACGCTGTT CTCGCTGCTC GACACCTGCA TGACGGGCAT GGGCAGCCGG
CTGCTCAAGC GCTGGCTGCT GTCGCCCCGG CGCGACCGCG GCGAGGCGCA GGCCCGGCTC
GAAGCCATTG CGGCGCTCCA GTCCACGGTG CTGGGCGGCA CCGCCGCGCC CTGGCGCACC
TTGCGCGAAC AGCTCAAGAA CACCAGCGAC GTGGAACGCA TCGCGGCGCG CATCGCGCTC
AGGCAGGTGC GCCCGCGCGA ACTGCTCGCG CTGCGCCTCG CGCTTGCAAA GGCCGAGCAG
CTGGCCCCGG CGCTTCCGGC GTCCGGCGAA CTGCTGGGCG GCATCATCGA ACGGCTCGCG
CCGCCGTCGG GCTGCGCCGA CCTGCTGGCG AGTGCGATCA AGCCCGACCC CTCGGCGCTG
GTGCGCGACG GCGGCGTGAT CGCCACCGGC CACGACGCCG AACTCGACGA GCTGCGCGCG
ATCAGCGAGA ACTGCGACGA TTTTTTGCTG AAGCTCGAAG TCAGCGAACG CGAGCGCACC
GGCATCAGCA ACCTGCGGGT GCAGTTCAAC CGCGTGCACG GCTTCTACAT CGAGGTCACG
CAAAGCGCGC TCTCCAAGGT GCCCGACAAC TACCGCCGCC GCCAGACGCT GAAGAATGCC
GAGCGCTTCA TCACGCCCGA GCTCAAGGCC TTCGAGGACA AGGCGCTGAG CGCGCAGGAC
CGGGCCCTTG CCCGTGAGAA GTGGCTCTAC GAGCAATTGC TCGACGCGCT GCAGCCCTCG
GTGCCCGCGC TCACGCAGCT GGCCGGCGCC ATTGCCACGC TCGATGCGCT GTGCGCGCTG
GCCGAGCGCT CGCACACGCT GCACTGGCGC GCGCCGAGCT TCGTCTCGCA CCCCTGCATC
GAGATCCAGC AGGGCCGCCA TCCGGTGGTG GAGGCGCGGC TGGCCGAAAA ATCGTCGGGC
GGCTTCATCG CCAACGACAC GCAGCTCGGG CCGCAGCAGC GCATGCAGGT GATCACCGGC
CCCAACATGG GCGGTAAGTC AACCTACATG CGGCAGGTGG CGATCATCGT GCTCCTGGCT
TCCATCGGCT CGCACGTGCC GGCGGCGGCC TGCCGGCTCG GGCCGATCGA CGCCATCCAC
ACCCGCATCG GTGCCGCGGA CGACCTGGCC AACGCGCAGT CGACCTTCAT GCTCGAGATG
ACCGAGGCCG CGCAAATTTT GCACAGCGCC ACCGCCCAGT CGCTGGTGCT GATGGACGAG
ATCGGCCGCG GCACCAGCAC CTTCGACGGC CTGGCGCTGG CCGCGGGCAT CGCGGCCCAG
CTGCACGACC GCAGCAAGGC CTTCACGCTC TTTGCCACCC ACTACTTCGA GCTGACCGAA
TTCCCGGCCA CGCACCACTG CGCCGTGAAC ATGCATGTGA GCGCCACCGA GGCGGGCCGC
GACATCGTGT TCCTGCACGA AATGCAGCCC GGCCCGGCCA GCAAGAGCTA CGGCATCCAG
GTGGCGCGGC TCGCCGGCAT GCCGGCCGCA GTGGTCAACC ACGCGCGGCA GGCGCTCGAG
GCGCTCGAGT CGCAACACGC CCAGACGCGC GCGCAGGTCG ACCTGTTCGC CCCGCCCCCG
GCGGCCGAAA CGCCGATGGC CAGCGCCGTA GAATCCGCCC TGGCCGCGCT CGATCCTGAT
GCGATGACGC CACGGGAGGC GCTCGACGCG CTCTATGCCT TACAAAAACT GAACACGCGC
GAACGCGGCG CCGCGTAG
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| Protein sequence | MKTTTAQPSP STSDFSGHTP MMAQYLGLKA NHPDTLLFYR MGDFYELFWA DAEKAARLLD
ITLTQRGQSA GQPVVMCGVP FHAVDTYLAR LIKLGESVAI CEQVGEVGAS KGPVERKVVR
VVTPGTLTDS ELLNDKSESL LLAVHAGTRN FCGLAWLSVT GAELRLAECP ADALEAWIAR
IAPSELLYSA EVTPAFEQRL KAARAATPFT LSIRPAWQFD GGLGERKLSE QMGSNSLAAW
NAESLANAHA AAAALLGYAE HTQGRALSHV QRLSVERDGD LVELPPTTRR NLELVQTLRG
EDSPTLFSLL DTCMTGMGSR LLKRWLLSPR RDRGEAQARL EAIAALQSTV LGGTAAPWRT
LREQLKNTSD VERIAARIAL RQVRPRELLA LRLALAKAEQ LAPALPASGE LLGGIIERLA
PPSGCADLLA SAIKPDPSAL VRDGGVIATG HDAELDELRA ISENCDDFLL KLEVSERERT
GISNLRVQFN RVHGFYIEVT QSALSKVPDN YRRRQTLKNA ERFITPELKA FEDKALSAQD
RALAREKWLY EQLLDALQPS VPALTQLAGA IATLDALCAL AERSHTLHWR APSFVSHPCI
EIQQGRHPVV EARLAEKSSG GFIANDTQLG PQQRMQVITG PNMGGKSTYM RQVAIIVLLA
SIGSHVPAAA CRLGPIDAIH TRIGAADDLA NAQSTFMLEM TEAAQILHSA TAQSLVLMDE
IGRGTSTFDG LALAAGIAAQ LHDRSKAFTL FATHYFELTE FPATHHCAVN MHVSATEAGR
DIVFLHEMQP GPASKSYGIQ VARLAGMPAA VVNHARQALE ALESQHAQTR AQVDLFAPPP
AAETPMASAV ESALAALDPD AMTPREALDA LYALQKLNTR ERGAA
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