Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3587 |
Symbol | |
ID | 7970662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3789356 |
End bp | 3790333 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644794172 |
Product | magnesium and cobalt transport protein CorA |
Protein accession | YP_002945470 |
Protein GI | 239816560 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0598] Mg2+ and Co2+ transporters |
TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.677282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATCA ACTGCGTGGC CTACGAGAAC GGCGCCAAGC TTGCCGACAT TCCGGTCGAG GACATCAGCG AGTACATCTC CCGGCCCGGC TGCTTCGTCT GGGTGGCGCT GAGCGACGCC ACGCCGCAGG AGCTGGCCCA GATGCAGGAG GAGTTCAACC TGCATCCGCT CGCGGTGGAA GACGCCCAGC ACGGCCACCA GCGGCCCAAG GTCGAGGAAT ACGGCGATTC GCTCTTCGTC GTGATGCACC TGGTCGAGCC CTCTGCCGAG GGCGAGCACT GCGTGAACGT GGGCGAGGTC GACGTCTTCG TCGGCAAGAA CTACGTGCTG TCGGTGCGCA ACCGCAGCCA GCAGGGCTTC CTGGGCGTGC GCGAGCGCTG CGAGCGCGAG CCCGAGCTGC TGCGCAATGG CGCGGGCTTC GTGCTGTATG CGCTGATGGA TGCGGTGGTC GACCGCTACT TTCCGGTGAT CGATGCGCTC GAGGTGGAGC TCGAATCCAT CGAGCAGCAG ATCTTCACGC AGGGCGGTGC GGCGCGCGAC AAGATCAAGC AGCTGTACGA CCTGAAGCGG CGCAGCATGA TCCTCAAGCG CGCGGTGGCG CCGCTGGCCG AGGCGGCGGG CAAGCTGCAT GGCGGGCGGG TGCCGCAGAT CTGCATGAGT TCGCAGGAAT ATTTTCGCGA CGTGGCCGAC CACCTGGTGC GTATCAACGG CTCGATCGAC GCCATGCGCG ACACCATCGG CACGGCCATT TCGGTGAACC TCTCGATGGT CACGATCGAG GAGAGCGAAG TCACCAAGCG GCTGGCTGCC TGGGCCAGCA TCTTTGCGGT GTGCACCGCG TTCGCGGGCA TCTGGGGCAT GAACTTCGAG CACATGCCGG AGCTGAAATT CCGCTATGGG TATCCGGTGG CGCTGGTGCT GATTGCGGCC ACCTGCAGCT ATCTCTACTA CCGGTTCAGG CGCGCGGGCT GGCTCTGA
|
Protein sequence | MLINCVAYEN GAKLADIPVE DISEYISRPG CFVWVALSDA TPQELAQMQE EFNLHPLAVE DAQHGHQRPK VEEYGDSLFV VMHLVEPSAE GEHCVNVGEV DVFVGKNYVL SVRNRSQQGF LGVRERCERE PELLRNGAGF VLYALMDAVV DRYFPVIDAL EVELESIEQQ IFTQGGAARD KIKQLYDLKR RSMILKRAVA PLAEAAGKLH GGRVPQICMS SQEYFRDVAD HLVRINGSID AMRDTIGTAI SVNLSMVTIE ESEVTKRLAA WASIFAVCTA FAGIWGMNFE HMPELKFRYG YPVALVLIAA TCSYLYYRFR RAGWL
|
| |