| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3540 |
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| Symbol | rpsU |
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| ID | 7972166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3736743 |
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| End bp | 3736955 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644794125 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_002945423 |
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| Protein GI | 239816513 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0453734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA TCCGCGTTAA AGAAAACGAG CCTTTCGACG TCGCCCTGCG CCGCTTCAAG
CGCACCATCG AAAAGCTCGG CCTGCTGACC GACCTGCGTG CCCGCGAGTT CTACGAAAAG
CCGACCGCCG AGCGCAAGCG CAAGAAGGCA GCCGCCGTCA AGCGCCACTA CAAGCGCGTG
CGCAGCATGC AGCTGCCCAA GAAGCTGTAC TAA
|
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| Protein sequence | MTTIRVKENE PFDVALRRFK RTIEKLGLLT DLRAREFYEK PTAERKRKKA AAVKRHYKRV
RSMQLPKKLY
|
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| |