| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3538 |
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| Symbol | |
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| ID | 7972164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3734563 |
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| End bp | 3735354 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794123 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945421 |
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| Protein GI | 239816511 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3863] Uncharacterized distant relative of cell wall-associated hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGC GCCATCTCCG CGCGGCGGCG CTTGCCGCTT GCGCATCGCT GCTGCTGCTG
CTGTCGGCCT GCGCCACCCG CGTCGACCTG CCGTCCAAGG ACGCGGGGCT GCGCCTGCGC
GTGCAGAGCT CGGTCATCGC GCCCGGCAAC GGCGGCGAGC TCATTGCCGC CGATGCGCTG
CAGCCCGGCG ACATCCTGCT GACCTCCATC GCCACGGTCA ATTCCTTCGG CATCCGGCTG
GGCACCTTCT CGCCCGTGAG CCATGCCGTG CTCTACCTGG GCGACGGCCT GATCGCCGAG
GCGGTCGGCA GCGGCGTGCG CGCGCGGCCG CTGGCCGACG TGGTGGACGA GGAGCAGATG
GTCGTGGCCT TCCGCGTGCC CGGGCTCGAT GACTCGGGGG CCCGGAAACT GCGCGCCTGG
GCCAACTCGC AGGTGGGCAT CCGCTACAAC ACCACCGGCG TGCTGCTGAA TGCGCCCTTC
GTGCTGAACC GGCGCCTGTG CGAGCTGCCG CTCATTCCCT CCGCCGTGAG CCACTACTGC
ATCAGCGGCA TGGCCATGGT GCAGCTGGGC GCGAGCCGCG ACGACCAGTT CTTCTGCTCG
CAGTTCGTGC TCGAGGCCTA CCGCCAGGCC GGCCTGCCGA TCACCGACGC CGACCCGCGC
TGGGTCAGCC CGGCCGACCT GCTGCACATG CGCGAGGGCG ATGTGCCCTC GATTGCCGCC
ACGCAGCCGC TGCGCTACGT GGGCCACCTC AAGTACAACG CGCCGCCGCT GCTGGCGGCC
GATGGACCCT GA
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| Protein sequence | MARRHLRAAA LAACASLLLL LSACATRVDL PSKDAGLRLR VQSSVIAPGN GGELIAADAL
QPGDILLTSI ATVNSFGIRL GTFSPVSHAV LYLGDGLIAE AVGSGVRARP LADVVDEEQM
VVAFRVPGLD DSGARKLRAW ANSQVGIRYN TTGVLLNAPF VLNRRLCELP LIPSAVSHYC
ISGMAMVQLG ASRDDQFFCS QFVLEAYRQA GLPITDADPR WVSPADLLHM REGDVPSIAA
TQPLRYVGHL KYNAPPLLAA DGP
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