Gene Vapar_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3510 
Symbol 
ID7972135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3700827 
End bp3701186 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content56% 
IMG OID644794094 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_002945393 
Protein GI239816483 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCG ATTCCTATCT CCCCGTCCTC TTGTTCATTT TGGTCGGTGT CGGTGTAGGT 
GTCGCACCGC AAGTCATCGG CTACATCCTG GGTCCCAACC GGCCTGACGC AGCGAAGAAC
GCTCCCTACG AGTGCGGCTT CGAGGCCTTC GAGGATGCGC GCATGAAATT CGACGTGCGC
TATTACCTCG TCGCCATTCT CTTCATCCTG TTCGATCTCG AGATTGCCTT TCTCTTTCCA
TGGGCCATTG CGCTCAAGGA AATCGGCGCC GTCGGCTTCT GGGCCATGAT GATCTTTCTC
GCCATCCTCG TCGTGGGCTT TGCCTACGAG TGGAAAAAAG GCGCGCTCGA CTGGGAATGA
 
Protein sequence
MNLDSYLPVL LFILVGVGVG VAPQVIGYIL GPNRPDAAKN APYECGFEAF EDARMKFDVR 
YYLVAILFIL FDLEIAFLFP WAIALKEIGA VGFWAMMIFL AILVVGFAYE WKKGALDWE