| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3501 |
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| Symbol | |
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| ID | 7972126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3692040 |
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| End bp | 3692696 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794085 |
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| Product | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 |
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| Protein accession | YP_002945384 |
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| Protein GI | 239816474 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTCA AGACCGGTCT GTTCTATCTG TTTGCCGCGG TGCTGCTGTT CGCAGCCTTC
CGCGTCATCA CCGCCCGCAA TCCCGTGTAC GCCGCGCTGT ACCTGGTGCT GGCCTTCTTC
CAGGCTTCGG CGATCTGGCT CTTGCTGCGC GCCGAGTTCC TGGCGATCTC GCTGGTGCTC
GTCTACGTGG GAGCGGTGAT GGTGCTGTTC CTGTTCGTCG TGATGATGCT GGACATCAAC
GTCGACGGCC TGCGGCAGGG CTTCTGGAAG CACTTTCCGC TGGCTGCCGG CGTGGGCGCG
CTGATTGCGC TCGAAATGGC CGCCGTGCTG ATGGGCGGCT TCCGACTGGA GGCACCGCGC
GCCGGTGCCG CCGCGGCAGC CCACGGCTCG AACACGCTCG AACTCGGCAA GCTGCTGTAC
TCCGAGTACC TGTATCCGCT GGAGATTGCG GCCGTCATCC TGCTCGTGGC GATCGTGGCG
GCCATTGCGC TCACGCTGCG CACCCGCAAG GACAGCAAGT ACGTCAACCC GTCCGACCAG
GTGCGCGTGA AGGCGCGGGA CCGCGTGCGC ATCGTGCAGA TGGCGGTCAC GCGCGCCGCC
GAACCCGTGG TGGAAGCACC CGCAGACGCA GCTGCGGCAA AGGAAAACAA GGCATGA
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| Protein sequence | MDVKTGLFYL FAAVLLFAAF RVITARNPVY AALYLVLAFF QASAIWLLLR AEFLAISLVL
VYVGAVMVLF LFVVMMLDIN VDGLRQGFWK HFPLAAGVGA LIALEMAAVL MGGFRLEAPR
AGAAAAAHGS NTLELGKLLY SEYLYPLEIA AVILLVAIVA AIALTLRTRK DSKYVNPSDQ
VRVKARDRVR IVQMAVTRAA EPVVEAPADA AAAKENKA
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