Gene Vapar_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3500 
Symbol 
ID7972125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3691735 
End bp3692043 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content59% 
IMG OID644794084 
ProductNADH-ubiquinone oxidoreductase chain 4L 
Protein accessionYP_002945383 
Protein GI239816473 
COG category[C] Energy production and conversion 
COG ID[COG0713] NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCA CGCTCGGACA CTTCCTATCG CTCGGCGCCA TGCTCTTTGC GCTGTCGGTG 
ATCGGCATCT TCCTGAACCG CAAGAACCTC ATCGTGCTGC TGATGGCCAT CGAGCTGATG
CTGCTTGCGG TGAACATGAA CTTCGTGGCG TTCTCGTACT ACCTGGGCGA CATGCACGGC
CAGATCTTCG TGTTCTTCAT CCTGACGGTG GCCGCGGCCG AGTCGGCCAT CGGCCTTGCG
CTGCTGGTCC TGCTGTTCCG CAACAAGTCG AACATCAACG TGGACGAACT CAACTCGCTC
AAGGGTTGA
 
Protein sequence
MTLTLGHFLS LGAMLFALSV IGIFLNRKNL IVLLMAIELM LLAVNMNFVA FSYYLGDMHG 
QIFVFFILTV AAAESAIGLA LLVLLFRNKS NINVDELNSL KG