| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3494 |
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| Symbol | |
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| ID | 7972119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3685184 |
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| End bp | 3685657 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794078 |
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| Product | protein of unknown function DUF1178 |
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| Protein accession | YP_002945377 |
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| Protein GI | 239816467 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5319] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.418231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTTC TCGATCTGCG CTGCTCGCAT GGCCACGGCT TCGAGGGCTG GTTTGCGTCC
AATGAGGCTT TCGAAACCCA GCTGGCCGCC GGACTGGTGG AATGCCCGGT GTGCGCCGAC
ACGCGCATCG TCAAGCTGCT GAGCGCGCCG CGCCTGAACC TGGGCAACGC GAAGGCGCCG
GCGGAGGCTG CCGCGGCATC GGCAGCGCCA TCTTCGGCAC CTGCCAAGGC CCAGGCACCC
GCCGAACAGT CCCCGGAGGC CCGCTGGATG CGCGCCGTGC GCGAGGTTCT CGCAAAGACA
GAGGACGTGG GCGAACGTTT TGCCGACGAG GCGCGCAGGA TGCACTACGG CGAAGCCGAA
GAGCGCGGCA TCCGCGGCCA GGCGACCCGC GAGCAGGCCG AGGCGCTGCT CGAAGAGGGC
ATTCCGGTGA TGGCCCTGCC CATCCCCGCA GCGCTCAAGG AAACGCTGCA GTAG
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| Protein sequence | MKVLDLRCSH GHGFEGWFAS NEAFETQLAA GLVECPVCAD TRIVKLLSAP RLNLGNAKAP
AEAAAASAAP SSAPAKAQAP AEQSPEARWM RAVREVLAKT EDVGERFADE ARRMHYGEAE
ERGIRGQATR EQAEALLEEG IPVMALPIPA ALKETLQ
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