| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3467 |
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| Symbol | |
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| ID | 7972578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3651681 |
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| End bp | 3652679 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794051 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945350 |
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| Protein GI | 239816440 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.25166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGCT GGTCCCTCCT TGCCTCCGTT CTTTCGCTGT GCGCCCTCCT GGCCGCCGGC
TGCTCCACAT TCGACGAACA GCAGCGCGAG TGGATCTTCC AACCCAGCGA CCGCAGCTGG
GGCAACACCG CGACCATGAC CGAGGGCATG CAGGACGTCT GGATCGACTT CCAGTCCTCC
ATCACCGGCG AATCCGCCCG CCTTCACGGC CTCTGGCTCG GCGGCGAGCC CGAGACCACC
GACCGTCCGG TCATGCTGTA CCTGCACGGC GCCCGCTACA ACGTGGCCGG ATCGGCGCCG
CGCATCCAGC GCATGCACGA GCTCGGTTTC TCGGTGCTGG CCATCGACTA CCGCGGCTTC
GGCAAGAGCT CCAAGGGCCT GCCCTCGGAA GAATCGGCGC GCGAGGACGC GCGCGCCGCC
TGGACCTGGC TCGCAGCCCG GCATCCGCGG CAGCACCGCT ACATCTTCGG CCACTCGCTG
GGCGGCGCCA TCGGCATCGA CCTGGCCGCC AGCGTCAACG ACGAGAGCGG CACCATCGTC
GAAAGCACCT TCACCTCCAT TGCCGACGTG GTGAGCGGCT TCAAGTGGGG CTGGCTGCCG
TTCGGCCCGT TCATCACGCA GCGCTTCGAG GCCATCAACC GCGTCAAGGA CATCGGCGCG
CCGCTGCTGG TGGTGCATGG CACCGCCGAC AGCCTGATCA ACCCTACGCT GGGCCGCAAG
CTCTACAACG CGGCCACCGT GCCCAAGCTC TTCGTGCTGG TGGAGGGTGG ATCGCACCAC
AACACCAATT CGATCGGCGA GGCGCAGTAC CGCTCGGCGC TCTCGCAGCT GTTCCGCATG
AAGCCCGAGA CCACGCTGGC TTCGCGGCAA GGGGAAGGCA CGCCGGTGCT GCGCGGCACG
CCATCGCTGC CGGCCGCGCC GGCGTCCCCG CGCACCGATT CGCCCGCCCT GCCGCAGGAA
GCGCGCGGCA AGGCCAGCGC CAGCGCGCAG GCGATCTGA
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| Protein sequence | MKRWSLLASV LSLCALLAAG CSTFDEQQRE WIFQPSDRSW GNTATMTEGM QDVWIDFQSS
ITGESARLHG LWLGGEPETT DRPVMLYLHG ARYNVAGSAP RIQRMHELGF SVLAIDYRGF
GKSSKGLPSE ESAREDARAA WTWLAARHPR QHRYIFGHSL GGAIGIDLAA SVNDESGTIV
ESTFTSIADV VSGFKWGWLP FGPFITQRFE AINRVKDIGA PLLVVHGTAD SLINPTLGRK
LYNAATVPKL FVLVEGGSHH NTNSIGEAQY RSALSQLFRM KPETTLASRQ GEGTPVLRGT
PSLPAAPASP RTDSPALPQE ARGKASASAQ AI
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