| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3429 |
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| Symbol | |
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| ID | 7972540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3618897 |
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| End bp | 3620120 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794013 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002945312 |
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| Protein GI | 239816402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCT CTTCTCCCAC TCTCTCGATC AAGCAGGTGC TGATCTGCGG CGCCATGATC
GTCACGCTCT CCATGGGCAT CCGCCACGGC TTCGGCCTCT GGCTGCAGCC GATCACGCAG
GCGCAGGACT GGAGCCGCCA GACCTTCTCG TTCGCGCTGG CCGTGCAGAA CCTGTCGTGG
GGCATCTTCG GCGTGTTCGC GGGCATGGTG GCGGATCGCT TCGGCGCCTT CCGGGTGCTG
ATCGCCGGCA CGGCCTTCTA TGCGCTGGGC CTGCTGGGCA TGGCGTATTC GCCCACGCCG
CTGCTGTTCA CGCTGAGCGC CGGCGTGCTG ATCGGCGCGG CGCAAGCCGG CACCACCTAT
GCGGTCGTCT ACGGCGTGAT CGGGCGCCAG ATCCCGGCCG AGCGGCGCTC CTGGGCCATG
GGCGTGGCGG CGGCGGCCGG CTCCTTCGGG CAGTTCCTTT TGGCGCCGAT CGAGGGGCTC
TTGATCAGGC AGCTGGGCTG GCAGAGCGCG CTTGCGGCGG TGGCGATGCT GGCGCTGGTG
ATCATGCCGC TGGCCTTCGG CCTGCGCGAA CCGCAGCGCG GCGCGCTCGC CGGGCACCGT
GACCAGTCGG TGCTGCAGGC GGTGGGCGAG GCCTTCCGCT ACCCGAGCTT CGGGCTGCTG
ATGGCGGGGT ATTTCGTCTG CGGCTTCCAG CTCGCCTTCA TCGGCATCCA CATGCCGACC
TACCTGCGCG ACCAGCGCCT GCCAGCCGAG GTGGCGGGCT ACGCGCTGGC GCTGATCGGG
CTCTTCAACG TGTTCGGCAC CTACACGGTC GGGCTGCTGG GCCAGAAGCT GGCCAAGCGC
AAGATCCTGG CGGCCATCTA CTTTGCGCGG GCGGTCTCGA TCGCGCTGTT CCTCCTGGCG
CCCATTTCGC CGCTCAGCGT GTACGTGTTC TCGGCGGCCA TGGGCTTTCT CTGGCTGTCG
ACGGTACCCG CCACCAACGC GATCATCGCG GGCATCTTCG GCGTGGCGCA CCTGTCGATG
CTCAGCGGCT TCGTGTTCCT GAGCCACCAG GTCGGCTCGT TCATCGGCGT CTGGCTGGGC
GGCTACCTGT ACGACACCAC GGGCAGCTAC GACATCGTCT GGTACATCGC GATCGCGCTG
GGCGTGTTCG CGGCGCTGAT CAACCTGCCG GTGAAGGAAA GCGCCATCGC GCGCGGCGGC
CGGCCGGCCG CCATGCCCGG CTGA
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| Protein sequence | MQASSPTLSI KQVLICGAMI VTLSMGIRHG FGLWLQPITQ AQDWSRQTFS FALAVQNLSW
GIFGVFAGMV ADRFGAFRVL IAGTAFYALG LLGMAYSPTP LLFTLSAGVL IGAAQAGTTY
AVVYGVIGRQ IPAERRSWAM GVAAAAGSFG QFLLAPIEGL LIRQLGWQSA LAAVAMLALV
IMPLAFGLRE PQRGALAGHR DQSVLQAVGE AFRYPSFGLL MAGYFVCGFQ LAFIGIHMPT
YLRDQRLPAE VAGYALALIG LFNVFGTYTV GLLGQKLAKR KILAAIYFAR AVSIALFLLA
PISPLSVYVF SAAMGFLWLS TVPATNAIIA GIFGVAHLSM LSGFVFLSHQ VGSFIGVWLG
GYLYDTTGSY DIVWYIAIAL GVFAALINLP VKESAIARGG RPAAMPG
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