Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3377 |
Symbol | |
ID | 7970615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3556784 |
End bp | 3557704 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644793961 |
Product | ATPase associated with various cellular activities AAA_3 |
Protein accession | YP_002945260 |
Protein GI | 239816350 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.28342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTTG CTGCGAAGCT TGCCACTTTG CTGAGTCAGC TTAACACGGT GATCGTGGGC AAGGAGCCCC AGGTGCGCGA CTGCGTGGCC TGCCTGCTCG CGGGCGGGCA CCTGCTGATC GAGGATGTGC CGGGCGTCGG CAAGACCACC CTCGCCCATG CGCTGTCGCA CACCTTCGGG CTGCAGTTTT CCCGCGTGCA GTTCACCGCC GACCTGATGC CGGGCGACCT TTCGGGCGTA GCGATCTACG ACCGGGGCCA GCAGGCCTTC GTCTTCCACC CCGGGCCGAT CTTCGCGCAG GTGCTGCTGG CGGACGAAAT CAACCGCGCC AGCCCCAAGA CGCAGAGCGC GCTGCTCGAG GCCATGGAAG AAAAGCAGGT CACCATCGAA GGCGAGACGC GGCCGCTGCC CACGCCCTTC TTCGTGATTG CCACGCAGAA CCCGCAGGAC CAGCTCGGCA CCTTCGCCTT GCCCGAATCG CAGCTCGACC GCTTCCTCAT GCGCATCTCG CTGGGCTACC CCGACCGCGC CGCCGAACGC GAGCTGCTCT CGGGCGCCGA CCGCCGCGAA ATGCTGGCCA CCCTGCCCGC GCTCCTGACC GCGGGCGAGC TCACTGCGCT GCAGCAGCGC GTGCAGCAGG TGCATGCGGC CGAGCCGCTG CTGAACTACG TGCAGGACCT GATCGCGGCC ACGCGCTCCG GCCGCTGGTT CCTGCAGGGC CTCTCGCCGC GCGCCGGCAT TGCCGTGCTG CGCGCCGCCA AGGCGCAGGC ACTGCTGGCC AACCGCAACT ACGTTGCGCC CGACGACGTG CAGTCGATCC TGCCGCAGAC CATTGCGCAC CGCCTCACGC CGGTGGGCGA CGCGGGCCGG GGCGCGGTGG AGCAGGTGCG CGCGATGATC GCGGACGTGC CGCTGCCGTG A
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Protein sequence | MDVAAKLATL LSQLNTVIVG KEPQVRDCVA CLLAGGHLLI EDVPGVGKTT LAHALSHTFG LQFSRVQFTA DLMPGDLSGV AIYDRGQQAF VFHPGPIFAQ VLLADEINRA SPKTQSALLE AMEEKQVTIE GETRPLPTPF FVIATQNPQD QLGTFALPES QLDRFLMRIS LGYPDRAAER ELLSGADRRE MLATLPALLT AGELTALQQR VQQVHAAEPL LNYVQDLIAA TRSGRWFLQG LSPRAGIAVL RAAKAQALLA NRNYVAPDDV QSILPQTIAH RLTPVGDAGR GAVEQVRAMI ADVPLP
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