| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3367 |
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| Symbol | |
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| ID | 7970605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3543291 |
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| End bp | 3544895 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793951 |
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| Product | cytochrome bd ubiquinol oxidase subunit I |
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| Protein accession | YP_002945250 |
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| Protein GI | 239816340 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG ACATCGTTGC GCTATCGCGC CTGCAGTTCG CCGCCACGGC GCTCTACCAC
TTTTTGTTCG TGCCGCTGAC GCTCGGGCTG TCGATCATCC TCGCGGTCAT GGAAACCGTC
TACGTGATGA CGGGCCGCGT GATCTGGCGC GACATGACCA AGTTCTGGGG CGTGCTGTTC
GGCATCAACT TTGCGATGGG CGTGGCCACC GGCGTGGTGA TGGAGTTCCA GTTCGGCATG
AACTGGAGCT ACTACAGCCA CTACGTCGGC GACATCTTCG GCGCGCCGCT GGCCATCGAG
GGGCTGATGG CCTTCTTCAT GGAAGCCACC TTCGTGGGCC TGTTCTTCTT CGGCTGGGAC
AAGCTCTCCA AGGTGGGCCA CCTGGTCGCG ACCTGGGCCG TGGCCATCGG CTCCAACTTC
TCGGCGCTGT GGATCCTCAT TGCCAACGGC TGGATGCAGA ACCCCGTGGG CGCGGCCTTC
AATCCGCAGA CCATGCGCAT GGAGGTGACG GACTTCTTCG CGGTGCTGAC CAACCCCGTG
GCGCAGGCCA AGTTCGTGCA CACCGTGTCG GCGGGCTATG TGTGCGCGGC GGTGTTCGTG
CTCGGCGTGT CGGCCTGGTA CGTGCTCAAG GGCCGCCACC TCGAATTGGC CAAGCGCTCG
ATGACGGTCG CGGCCTCGTT CGGCCTGGCG GCGTCGCTGT CGGTGGTGGT GCTGGGCGAC
GAGAGCGGCT ACCTGTCGAC CGAACACCAG AAGATGAAGC TCGCCGCCAT CGAGGCCATG
TGGGAGACGC ATCCCGCGCC TGCGGCGTTC ACCGCCTTCG GCTTCCCCGA CCAGGAAGCG
CGCGAGACGC ACTACGCCAT CCATATTCCG GCGGTGATGG GGCTGATCGG CACGCGCTCG
CTCAATACCG TGATCCCCGG CATCGACGAG CTCGTGAAGC GCGCCGAGGT GCGCATCCGC
GAAGGCATCA AGGCCTACGA CGCGCTGCAG CAGATCCGCG CCGCCGGCAG TACGCAAGCC
GTGCCGCAGG GCGTGCGCGA TGCCTTCGAG AACGGCGGCA CCGACATGGG CTATGCGCTG
CTGCTCAAGC GCTATGTCGA CGACCCGCGC AACGCCACGC CCGAGCAGAT CGCCAAGGCC
GCATGGGACA CCGTGCCGCA GGTGGCGCCG CTGTTCTGGC TGTTCCGGAT CATGGTGGGC
ATCGGCATGC TGCTGATCGT GCTGACGGCC ACCTTCTTCG TGCTTTCGGC GCGGCGCCGG
CTCGACCGCC ACCGCTGGCT GCTCAGGGCC GCGGTGCTGG CCATCCCGCT GCCGTGGATC
GCCATCGAGT CCGGCTGGCT GGTGGCCGAG TTCGGCCGCC AGCCCTGGGT GATCGAAGGC
GTGCTGCCAA CGGCGGTGGC GGTGTCGAAC CTGGGCGTGA AGACGCTGCT CATCACGCTT
GGCGGCTTCA TCGCGATCTA CACCACGCTC TTCATCATCG AGATGAAGCT GCTGCTCAAG
GTGATACGCA AGGGGCCGGA GGCCGAGCAT GCACCCGATG TCGGCGAAGC CCGGTCCCAT
GTTCCGCCAG TTCGCGCCAT GGCGGCGCCA GGGAGTTCCT CATGA
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| Protein sequence | MDLDIVALSR LQFAATALYH FLFVPLTLGL SIILAVMETV YVMTGRVIWR DMTKFWGVLF
GINFAMGVAT GVVMEFQFGM NWSYYSHYVG DIFGAPLAIE GLMAFFMEAT FVGLFFFGWD
KLSKVGHLVA TWAVAIGSNF SALWILIANG WMQNPVGAAF NPQTMRMEVT DFFAVLTNPV
AQAKFVHTVS AGYVCAAVFV LGVSAWYVLK GRHLELAKRS MTVAASFGLA ASLSVVVLGD
ESGYLSTEHQ KMKLAAIEAM WETHPAPAAF TAFGFPDQEA RETHYAIHIP AVMGLIGTRS
LNTVIPGIDE LVKRAEVRIR EGIKAYDALQ QIRAAGSTQA VPQGVRDAFE NGGTDMGYAL
LLKRYVDDPR NATPEQIAKA AWDTVPQVAP LFWLFRIMVG IGMLLIVLTA TFFVLSARRR
LDRHRWLLRA AVLAIPLPWI AIESGWLVAE FGRQPWVIEG VLPTAVAVSN LGVKTLLITL
GGFIAIYTTL FIIEMKLLLK VIRKGPEAEH APDVGEARSH VPPVRAMAAP GSSS
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