Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3331 |
Symbol | |
ID | 7970569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3510719 |
End bp | 3511729 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793916 |
Product | hypothetical protein |
Protein accession | YP_002945215 |
Protein GI | 239816305 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGACG ACTTCTTCCT GAACGATCCG CAGCCCACGC GCCGCCAATG GCTGCAAGGC GGCAGCGCCC TGGCCCTGGG CGGCCTGCTG CCTTCGCTGG CCTCGGCCCA GGCCGGCTGG CCGAGCAAGT CGGTGCGCTT CGTCGTGCCC TTTGCGCCGG GCGGCAGCTC GGAGATCGTG GCGCGCTCCA CCGCCGCCGA GCTCTCGCGC ACGCTGGGCC AGAGCGTGTT CGTCGACAAC AAGCCGGGCG CGGCCGGCAA CATCGCAATG AGCGAGGTGG CGCGCAGCAC CGACCAGCAC ACGATCATCC TCGGCCACAT CGGCACGCTG GCGGTCAATC CGTTCATCTT CGCCAAGCTG CCCTACGACC CCAACAAGGA CTTCAAGCCC GTGAGCCTGC TGGCCAAGGT GCCCAGCCTC TACGTGGTGC ACCCCGACGT GCCCGCGAAG AACCTCAAGG AATTCATCGC CTACGCCAAG TCGAAGCCGG GCAAGCTGAG CTACGGCTCC GCGGGCAACG GCAGCGCGGG CCACCTGGCC TTCGAATACC TGAAGATGAC CGCGGACGTG TTCATGCTGC ACGTGCCCTA CCGCGGCACC GGGCCGATGG TGACCGACCT GCTCTCGGGC CGGCTCGACG CCTCGGCCAT CGGCGCCGCG GCCATCATTC CGTTCATCAA GGCCGGCAAG GTGCGCTGCA TCGCCACCGG CTCGGCCAAG CGCCTGGCGC AGCTGCCCGA CGTGGCCACG GTGGCCGAGC AGGGCTTCCC CGGCTTCGAG ATGACGCAGT GGTACGGCAT GCTCGCGCCG GCCAACATGG AGCCCGCGAA CCTGGCCCGG CTCTCGGCCG AGACGATGAA GGCCGTGAAG TCGCCCGATT CGATGCAGCG GCTCACGGCC GATGCCGCCG AAGCCGTCGG CGGCACGCCC GAGCAGTTCG CGCAGTTCAT CGCGGCCGAG CAGGCGCGCT GGAAGAAGGT CATTGCAAGG GCAAACATCA AGCCCGACTG A
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Protein sequence | MFDDFFLNDP QPTRRQWLQG GSALALGGLL PSLASAQAGW PSKSVRFVVP FAPGGSSEIV ARSTAAELSR TLGQSVFVDN KPGAAGNIAM SEVARSTDQH TIILGHIGTL AVNPFIFAKL PYDPNKDFKP VSLLAKVPSL YVVHPDVPAK NLKEFIAYAK SKPGKLSYGS AGNGSAGHLA FEYLKMTADV FMLHVPYRGT GPMVTDLLSG RLDASAIGAA AIIPFIKAGK VRCIATGSAK RLAQLPDVAT VAEQGFPGFE MTQWYGMLAP ANMEPANLAR LSAETMKAVK SPDSMQRLTA DAAEAVGGTP EQFAQFIAAE QARWKKVIAR ANIKPD
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