| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3319 |
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| Symbol | |
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| ID | 7973715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3497747 |
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| End bp | 3499156 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793904 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002945203 |
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| Protein GI | 239816293 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.621716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCA TCACGGCCCA CGAGCCGAAA GGCAAGCACC AGTCGAAGAA GGCCACCGCG
AGCGGCTGGA TCGGCTCGGC GCTGGAGTAC TACGACTTCT TCATCTACGC CACTGCGGCG
GCGCTGATCT TTCCGCAGAT CTTCTTTCCC AAGGGCGACC CGCAGATCGC GATCATCGCG
TCGCTCGCGA CCTACGGCGT GGGCTACGTC GCACGGCCGA TCGGTGCGCT GCTGCTGGGC
CACTGGGGCG ACACGCACGG CCGCAAGACG GTGCTCATTT TGTGCATGTT CCTGATGGGC
TTTTCCACCG TCGCCGTCGG CCTGCTGCCC ACCTACGACC AGGTCGGCCT GTGGGCGCCC
GCGCTGCTGG TGCTGCTGCG CCTGATCCAG GGCTTTGCGG TGGCTGGCGA GATCTCGGGC
GCGAGCTCGA TGATCCTAGA GCACGCGCCG TTCGGACGCC GCGGCTTCTT CGCGAGCTTC
ACGCTGCAGG GCGTGCAGGC CGGCCAGATC ATGGCGGCCG CGGTGTTCCT GCCGCTCGCG
CACTACATGG ACAAGGACGC TTTCAACGCC TGGGGCTGGC GCATTCCGTT CCTGCTGAGC
TTCATCGTCA TCGTGGCCGG CTACATCATC CGCAGGGAAG TGGAGGAGAC CCCCGCCTTT
GCCGAAGTCG AGAAGAGCGC GCAGGTGCCG AAGGCGCCCG TCATCCAAGC CGTGACCGAG
AGCTGGGGCG ACATGCTGCG CGTGCTGCTG TGCTCGCTGA TGAACGTGAT CCCGGTGGTC
GCGACCATCT TCGGCGCCGC CTACGCGGTG CAGCCGGGCT ACGGCATCAA CTTCGAGAAG
GACATCTACC TCTGGATTCC GGTGATGGGC AACATCCTGG CCGTGATCGT GATCCCGTTC
GTCGGCAACC TGTCGGACAA GGTCGGGCGC CGCCTGCCGA TCGCCGTGGG TGCCATCGGT
TCGGGCCTGC TGTCGTTCGG CTACCTGTAT GCCATCAGCA TCCACAACGT GCCGCTGGCC
ATCGTGATGT CGCTGCTGAT GTGGGGCGTG GTCTACCAGG GCTACAACGC CGTGTTCCCG
AGCTTCTATC CGGAGATGTT CCCCACGCGC ACCCGCGTCT CGGGCATGGC GATCTCGCAG
AACATCGGCA CCGCGATCAC CGCGCTGCTG CCCGCGCTGT TCGTGGCGGT CGCGCCTCCC
GGCGCCGCCA ACATCCCGCT GACCGTCGGC GCCATCACGC TGGCGATCTG CGCCATTGCC
GCGGTCTCGG CCCTGAGCGC ACGCGAAACC TACCGCGTGC ACATGAACGA CCTGGGCAAG
CCCGATGCGG TGCCGGTCGA CAAGCTCGAG TACGACCGGC TGCGCGAAGA GACGCTCGCC
ACCGCACGCA TCGCCAAGGC AGCGGCCTGA
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| Protein sequence | MATITAHEPK GKHQSKKATA SGWIGSALEY YDFFIYATAA ALIFPQIFFP KGDPQIAIIA
SLATYGVGYV ARPIGALLLG HWGDTHGRKT VLILCMFLMG FSTVAVGLLP TYDQVGLWAP
ALLVLLRLIQ GFAVAGEISG ASSMILEHAP FGRRGFFASF TLQGVQAGQI MAAAVFLPLA
HYMDKDAFNA WGWRIPFLLS FIVIVAGYII RREVEETPAF AEVEKSAQVP KAPVIQAVTE
SWGDMLRVLL CSLMNVIPVV ATIFGAAYAV QPGYGINFEK DIYLWIPVMG NILAVIVIPF
VGNLSDKVGR RLPIAVGAIG SGLLSFGYLY AISIHNVPLA IVMSLLMWGV VYQGYNAVFP
SFYPEMFPTR TRVSGMAISQ NIGTAITALL PALFVAVAPP GAANIPLTVG AITLAICAIA
AVSALSARET YRVHMNDLGK PDAVPVDKLE YDRLREETLA TARIAKAAA
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