| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3296 |
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| Symbol | |
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| ID | 7973692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3473891 |
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| End bp | 3474385 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793881 |
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| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
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| Protein accession | YP_002945180 |
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| Protein GI | 239816270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.165555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAAA AATTCCTTGG CATCGAGCGC TGGACCACCG GCGCCTCGAT GCTTGCCGCC
TGCCTGATGC TGGTCATTGC ATCGGCCCTG GGCGTGTTCC AGATCGTGAC GCGCTTCGTG
CTCGAGCAGC CCGCGGAGTG GAGCGAGATC CTGATCCGCG TGAGCCTGAT CTGGATGGTG
TTCCTGGGCA TTCCGATGGC GTTTCGCCAG GGTGCCATGG TGAGCGTGGA CGTGCTCTAC
CGCTGGAGCC CGCCGCGCGT CAAGCGCGTG CTCGACGCCG TGGTGAGCAT TGCCGCGCTC
ATCCTGATGC TGGTCATTCT CTGGTGGGGC TGGGACTACG CGATGCGCGG CCGCGTGCAG
TCGATGGCCG GCCTCGAAAG CCTGTCGATG ATGTGGTCGT ACCTGGCGCT GCCGGTCGGT
TCCGTCTTCT GCCTGTTCGG CATCGTTGGG AATTTTCTCG ATCCCAAGCG GCTTGAGCTG
GAGACTGCGC AATGA
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| Protein sequence | MKEKFLGIER WTTGASMLAA CLMLVIASAL GVFQIVTRFV LEQPAEWSEI LIRVSLIWMV
FLGIPMAFRQ GAMVSVDVLY RWSPPRVKRV LDAVVSIAAL ILMLVILWWG WDYAMRGRVQ
SMAGLESLSM MWSYLALPVG SVFCLFGIVG NFLDPKRLEL ETAQ
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