| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3287 |
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| Symbol | |
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| ID | 7973683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3461575 |
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| End bp | 3461997 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793872 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002945171 |
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| Protein GI | 239816261 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0335707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCG AAATCCCCGA GAAGAAAAAG TTCGTGTTCG AGATGTCCAT CCCCATCCGC
TGGGGCGACA TGGACGCCAT GGGGCATCTG AACAACGGCA CCTATTTCCG CTACCTCGAA
ACCGCGCGCA TCGACTGGAT CCGCTCGCTC GGCATCGAGC CCGCGCCGGG CGGCGAGGGC
ATGGTGATCG TCAACGCCTT CTGCAATTTC TACCGGCAGA TCGAATACCC CGGCGACGTG
CTGCTCAAGA TGTACGTGAG CGACCCGGCG CGCACCACCT TCGAGAGCTG GGCCACCATG
GCGCGGGCCG AGGCGCCCGA GGTGATCTGC GCGGCCGGCG GGGCGACCAC GATCTGGGTC
GATTTTCCGA AGCAGAAGGC GCTGCCCTTG CCCGACTGGC TGCGCGCGGT GGTGAGCGAG
TAG
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| Protein sequence | MRIEIPEKKK FVFEMSIPIR WGDMDAMGHL NNGTYFRYLE TARIDWIRSL GIEPAPGGEG
MVIVNAFCNF YRQIEYPGDV LLKMYVSDPA RTTFESWATM ARAEAPEVIC AAGGATTIWV
DFPKQKALPL PDWLRAVVSE
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