| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3282 |
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| Symbol | |
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| ID | 7973678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3456291 |
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| End bp | 3458042 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793867 |
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| Product | sulfatase |
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| Protein accession | YP_002945166 |
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| Protein GI | 239816256 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.100906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTT CAAGAATCGA ACCCACGCCG GTACGGGACG TGGGTGCGCT GGCGGCCGGC
GCCTCCTTCC TGGCACCCGC GCGCGCGCTG TGGGCGCGCA TCGACCTGTG GCTCGCGCGG
CCCCGCTCGG CGCAGCGCGT GGTCGTCTGG CTTGCCCTCT ACCTTGCCGT GGCCGCCAAC
TGGCCGCTCT GGAACGAGCT TGCGCGCATC GGCGGCGCAC CCAGCACCTA CCTGCCCACG
AGCGCCGCCA TGGGGGTGCT CATGGTGTGC GCCACGGTGG CGCTGCTGTC CTTCACGGCC
TGGTCGCGCT GGATGAAGCC CTTGTGGTTC GCGGTGGTGC TGCTGGCGGC CTTCGTGCAG
CACTACATGA TCGAGTACCG CGTGGTGATG GACCCGACCA TGATCGCCAA CGTGCTGCAG
ACCGACCCGA ACGAGGCGCG CGACCTCATG AGCTGGCGCA TGGCCTACCA CGTGCTGCTG
GTGGCGCTGC TGCCTGCGTT GGCGCTCTGG CGCGCGCGCA TCGTGCCGAT GCGCTTTTTC
TCCAAGCTCT GGCGCAACGT GGCGCTGCTG CTGCTGGCGG TGGCGCTCGC CCTGGTGGCC
GCGGTGTCGA TGAACCGGCA GCTCGCCCCG CTGATGCGCA ACAACGTCCA CCTGCGCTAC
ATGATGAACC CGGTTGCAAG CCTCTATTCG GCCGGCTCGG TGGTCATCAA GCCGATGTTC
AAGCGCAGCC GCAAGCTGAT TCCCATCACG GCCGGAACGG CGCTGGGCGC GAGCTACGCG
GGCCAGGCGC GGCCGCCGAT GTTCGTGCTG GTGGTGGGCG AGACGGCGCG GGCCGACCAC
TTCGGCCTCA ACGGCTATGC GCGCAACACC ACGCCCGAGC TGGCGGCGCG CGGCGTGCTG
AGCTATCGCG ATGTGCATTC GTGCGGCACC AACACACTGG CTTCGGTGCC GTGCATGTTC
TCGCCGCTGG GCAAGCAGGG CTACGAATCG CGCAGCGACG ACTATGAAAA CCTGGTCGAC
GTGCTGCAGG CCGCCGGGCT GGCGGTGCTG TGGCTCGACA ACCAGGCCGG CTGCAAGGAC
GTGTGCACGC GCATTCCCAA CGCCTCCGCC TTCGACAGCC TCACGCCCGC GCAGAAGAGC
GCGCTGTGCG ACGGCGAGGA ATGCCTGGAC GACGTCATGC TCAAGGGGCT GGACGAGCGC
ATTGCCGCGC TGCCCGCCGA GCGCCGCGCC AAGGGCGTGG TGCTGGTCAT GCACCAGATG
GGTAGCCACG GGCCGGCCTA CTACAAGCGC TCCGCGCCGG AGATCAAGCG CTTCCTGCCC
GAGTGCAAGA CCAATGCGCT GGCCGAATGC GGCCATGCGG AGCTGCAGAA CGTCTACGAC
AACTCGATTG CGCAGACCGA TCATTTCCTG GGCCAGACCA TCGACTGGCT CAAGGCGCAG
TCCGGCCAGT ACGACCCGGC CCTGCTCTAC GTGAGCGACC ATGGCGAATC GCTCGGCGAA
TACGGCCTGT TCCTGCACGG CGTGCCCTAC AGCTTCGCAC CCGAGGCGCA GAAGCACGTG
CCCATGGTCA CCTGGTTCAG CCCCGGCATG AACGAGCGCC GCAAGCTGTC GCGCTCGTGC
ATGGAAGCGG GGCTCGATGC GCCGCTCACG CACGACAACC TCTACCACAC GGTGCTGGGG
CTGATGGACG TGAGCAATCC CACCTACAAG CCCGGCCTGG ACGCGCTCGC ATCCTGCCGA
GGCAAGGCCT GA
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| Protein sequence | MSFSRIEPTP VRDVGALAAG ASFLAPARAL WARIDLWLAR PRSAQRVVVW LALYLAVAAN
WPLWNELARI GGAPSTYLPT SAAMGVLMVC ATVALLSFTA WSRWMKPLWF AVVLLAAFVQ
HYMIEYRVVM DPTMIANVLQ TDPNEARDLM SWRMAYHVLL VALLPALALW RARIVPMRFF
SKLWRNVALL LLAVALALVA AVSMNRQLAP LMRNNVHLRY MMNPVASLYS AGSVVIKPMF
KRSRKLIPIT AGTALGASYA GQARPPMFVL VVGETARADH FGLNGYARNT TPELAARGVL
SYRDVHSCGT NTLASVPCMF SPLGKQGYES RSDDYENLVD VLQAAGLAVL WLDNQAGCKD
VCTRIPNASA FDSLTPAQKS ALCDGEECLD DVMLKGLDER IAALPAERRA KGVVLVMHQM
GSHGPAYYKR SAPEIKRFLP ECKTNALAEC GHAELQNVYD NSIAQTDHFL GQTIDWLKAQ
SGQYDPALLY VSDHGESLGE YGLFLHGVPY SFAPEAQKHV PMVTWFSPGM NERRKLSRSC
MEAGLDAPLT HDNLYHTVLG LMDVSNPTYK PGLDALASCR GKA
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