| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3268 |
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| Symbol | |
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| ID | 7973664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3440863 |
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| End bp | 3442038 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793853 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002945152 |
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| Protein GI | 239816242 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.304167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC TCGAAGGCCT CAAGGTGCTG GAGCTCGGCC AGCTCATCGC CGGCCCGTTC
GCCGGCAAGA CGCTCGCCGA GTTCGGCGCC GACGTGATCA AGGTCGAGCC CGCCGGCGTC
GGCGACCCGC TGCGCAAGTG GCGGCTGCTG CGCGAAGGCA CTTCGGTGTG GTGGGAGGTG
CAGTCGCGCA ACAAGCGATC GGTGTGCCTG GACCTGCGCA GCGCCGAAGG CCAGCAGGCG
GTGCGCGCGC TGGCGCTGGA AGCCGACGTG CTGATCGAGA ACTTCAAGCC CGGCACGCTC
GAAGGCTGGG GCCTGGGCTG GGAGCAACTG CATGCGCTCA ACCCGCGGCT CATCATGCTG
CGCATCTCGG GCTACGGCCA GACCGGGCCC TACCGCGACA AGCCGGGCTT CGGCGTGCTC
GGCGAATCGA TGGGCGGGCT GCGCTACCTG AGCGGTGAGC CGGGCCGGGT GCCCGTGCGC
GTGGGCGTTT CGCTGGGCGA CACGCTGGCG GCGCTGCATG GCGTGATCGG CGTGCTCACG
GCGCTGCACC ATCGCACGGC CCATGGCGGG CAGGGGCAGT TCATCGACGT GGCGCTCTAC
GAATCGGTCT TCAATGTGAT GGAAAGCCTG CTGCCCGAAT ACGACGCGTT CGGCGCGGTG
CGCGAGCGCG CCGGCAGCGC CTTGCCGGGC ATTGCGCCGA CCAATGCCTA CAAATGCAGC
GACGGCCACT ACGTGCTGGT GGCGGGCAAC GGCGACAGCA TCTTCCGCCG GCTGATGCGC
GCCATCGGCC GCGCCGACCT GGAGAACGAT CCGCAGCTCG TGCACAACGA CGGCCGCGTG
CAGCGCGTGG AAGAAATCGA TGCCGCCATC GAGGCCTGGA CGCTGCAGCG CAGCCGCGAC
GAGGTGCTGG CGGTGCTCGA CGCGGCCGGC GTGCCGGTCG GGCGTATCTA CACCGTGGCC
GACATCGCCA CCGATCCGCA GTACCTGGCG CGCCAGATGA TCGTCGAGGC GACCACTGCC
GACGGCGACA TGCTCAAGGT GCCGGGCGTC GTGCCCAAGC TCAGCGCCAC GCCGGGGCGC
ATCGTGCACC CCGCGCCGCG GCTCGGCGAA CACACGGCCG ACCTGCAGGG ATTGGGCTGG
CCGGCGCGCC GCACCGAAGA AAGCGAGGCC GTATGA
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| Protein sequence | MNALEGLKVL ELGQLIAGPF AGKTLAEFGA DVIKVEPAGV GDPLRKWRLL REGTSVWWEV
QSRNKRSVCL DLRSAEGQQA VRALALEADV LIENFKPGTL EGWGLGWEQL HALNPRLIML
RISGYGQTGP YRDKPGFGVL GESMGGLRYL SGEPGRVPVR VGVSLGDTLA ALHGVIGVLT
ALHHRTAHGG QGQFIDVALY ESVFNVMESL LPEYDAFGAV RERAGSALPG IAPTNAYKCS
DGHYVLVAGN GDSIFRRLMR AIGRADLEND PQLVHNDGRV QRVEEIDAAI EAWTLQRSRD
EVLAVLDAAG VPVGRIYTVA DIATDPQYLA RQMIVEATTA DGDMLKVPGV VPKLSATPGR
IVHPAPRLGE HTADLQGLGW PARRTEESEA V
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