Gene Vapar_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3266 
Symbol 
ID7973662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3439506 
End bp3439886 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content65% 
IMG OID644793851 
Productputative metallothiol transferase 
Protein accessionYP_002945150 
Protein GI239816240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.483715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC ACTTGGACCA CCTGGTGCTC ACCACCGCCC ATGAGGAGGC CTGCACCCGC 
TTCTACGTCG AGGTGATGGG CATGGCGCTG GAGACCTTCG GCGCCGACCG CAAGGCCTTT
CGCTTCGGCA ACCAGAAGAT CAACCTGCAT GTGAAGGGCC ACGAATTCGA GCCCAAGGCG
CAGCTGCCGA CGCCGGGCTC GCTGGACCTG TGCTTCATCG CGGGCGTGCC GCTGGAGGAT
GTGATCGCGC GGCTCAAAGA CAAGGGCGTG CCGATCCTCG AAGGCCCGGT GATGCGGACC
GGCGCCACCG CGCGCATCCG ATCGGTCTAC GTGCGCGACC CCGACCTGAA TCTCATCGAG
ATATCCGAGC TGGCGCCCTG A
 
Protein sequence
MIDHLDHLVL TTAHEEACTR FYVEVMGMAL ETFGADRKAF RFGNQKINLH VKGHEFEPKA 
QLPTPGSLDL CFIAGVPLED VIARLKDKGV PILEGPVMRT GATARIRSVY VRDPDLNLIE
ISELAP