| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3265 |
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| Symbol | |
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| ID | 7973661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3438489 |
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| End bp | 3439460 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793850 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945149 |
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| Protein GI | 239816239 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.262852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA CCCATCGCCT TCTGATCACC GCAGGCCTCG CGCTGGCGGC CGCCGCGGCC
AGCGCCGACA CCTGGCCCTC GAAACCGATC ACCTTCATCG TGCCCACCGC GCCCGCCGGG
TCCACCGACA TCATGGCGCG CATGGTGGCC GACCCGCTGC AGCGCGCGCT GGGCCAGCCC
ATCGTGGTCG ACAACAGGCC CGGCGCCAGC GGCAACATCG GCACCGAAGC CGTGGCGCGC
GCCGCGCCCG ACGGCTACAC GCTGCTGATG CAGTACTCGG GCTACCACGT CGGCAACCCC
GCGCTCTTTC CGCAGATCAA GTGGAGCCCG ACCAAGGACT TCGTGCCGGT GGCGCTAGTG
ATGCGCGCGC CGCACGTGGT CGCGGTGAGC GGCAAGCTGC CCGTCAATTC GATGAAGGAG
CTGATCGAGT ACGGCAAGAA GAAGAAAGAG GGCGGCCTGT TCTACGCCTC ATCGGGCAAC
GGCTCGATCC AGCACATCGC GGGCGAGCTG CTGTCGCGGC AGGCAAAGCA GCCCATGACG
CACGTGCCCT ACAAGGGTTC GGGCCCGGCC ATCAACGACC TGATCGCGGG CAACGTCGAC
ATGTTCATCA CCACGCCGCC CTCGGTCATC GGCCATTTCG CGGGCGGGCG CATCAAGGCG
CTCGCCTACA CGGGCAGCAA GCGCCATCCG TCGATGCCCG ACGTGCCGAC CTCGGCCGAG
GCGGGGCTGC CGGGCTACGA GGTGGAATCG TGGTTCGCGG TGTTCGCACC GGCCAAGACG
CCGCCCGACG TTGTCAACAA GCTCAGCGCC GAGATCAAGA AGATCGTCGA GAGCGAGCCG
TTCCGCAAGA AGGTGGACGA GCAGGGCGCC TTCGCCACCT ACATGGACCC GGTGGCCCTG
GGCAAGTTCG TCGACCAGGA ACTGGCAGCC TGGGCGAAGG TGATCAAGGC GGCGGACATC
AAGCCGGACT GA
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| Protein sequence | MKPTHRLLIT AGLALAAAAA SADTWPSKPI TFIVPTAPAG STDIMARMVA DPLQRALGQP
IVVDNRPGAS GNIGTEAVAR AAPDGYTLLM QYSGYHVGNP ALFPQIKWSP TKDFVPVALV
MRAPHVVAVS GKLPVNSMKE LIEYGKKKKE GGLFYASSGN GSIQHIAGEL LSRQAKQPMT
HVPYKGSGPA INDLIAGNVD MFITTPPSVI GHFAGGRIKA LAYTGSKRHP SMPDVPTSAE
AGLPGYEVES WFAVFAPAKT PPDVVNKLSA EIKKIVESEP FRKKVDEQGA FATYMDPVAL
GKFVDQELAA WAKVIKAADI KPD
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