| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3250 |
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| Symbol | |
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| ID | 7973646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3425564 |
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| End bp | 3426508 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793835 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945134 |
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| Protein GI | 239816224 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.228941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACC AGCTCCCGCC GCTCAACGCG CTGCGCGCCT TCGAGGCGAC CGCCCGCCAT
CTTTCGGTGA AGAACGCGGC CGACGAGCTG TGCGTGACCG CCGGCGCCGT GAGCCAGCTG
ATCAAGTCGC TGGAGCTGCA CCTGGGCATT GCGCTGTTCC GGCGCGCGAA CCGCGGCATC
TTCCTGACCG ATGCGGGCCA GGCCTACCTG CCGCCGGTGC GCAATGCCTT CCGGCAGATC
AGCGACGCCA CGCGCCGCAT CGCCATGCCC GCGGAAACCG GCATCCTCAC GGTGAGCACC
ACGCCGTTCT TCGCGTCAGC CTGGCTGGTG CCGCGCCTGA AGAGCTTTCA CGATGCGCAT
CCGGACATCG ACCTGCAGGT GGTGAGCAGC ACCGCGCTCG CCGATTTTTC GCGCGACGGC
GTGGACGTGG CGATCCGCCA TGGGCTCGGC CGCTATCCCG GCCTGATCAG CCAGCGCGTG
CTCACGGTGG AGATTGTTCC GGTTGCAACG CCGGCCCTGG TCAGGCAGCT CGGCATGCCT
GCATCGCCGG CCGATCTCAC GCGCTGGCCG CGCGTGAACG ATGCCGAGCG CAAGGGCTGG
GCCATGTGGT TCGAGGCGCA GGGCATCGAA GATGCAAGGC CGGCACGCGG CCCGTCCTTC
GATGATTCGG GCCTGTTGCT GAAGGCGGTG CTCGCAGGGC AGGGCGCGGG CTTGCTGCCG
GCGGCGCTGG TGGCGGACGA GGTGGCCGAA GGCCGGCTGG TCCAGCTGTC GGAAGCCGCG
TGGCTCGAAG ACTTTGCCTA CTACCTCGTG CACCCCGAAG ACAGCCGCCA CAGGCCGAAG
GTGGCGGCCT TCCGCGAATG GATCGCTGCC GAGTCCAGCA GAAAAGCTGC CAGGCCGCCC
AGGAAGACGC CTGTCAAAGC AGCTCGATCC CGGGCAGGCT CTTGA
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| Protein sequence | MEHQLPPLNA LRAFEATARH LSVKNAADEL CVTAGAVSQL IKSLELHLGI ALFRRANRGI
FLTDAGQAYL PPVRNAFRQI SDATRRIAMP AETGILTVST TPFFASAWLV PRLKSFHDAH
PDIDLQVVSS TALADFSRDG VDVAIRHGLG RYPGLISQRV LTVEIVPVAT PALVRQLGMP
ASPADLTRWP RVNDAERKGW AMWFEAQGIE DARPARGPSF DDSGLLLKAV LAGQGAGLLP
AALVADEVAE GRLVQLSEAA WLEDFAYYLV HPEDSRHRPK VAAFREWIAA ESSRKAARPP
RKTPVKAARS RAGS
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