Gene Vapar_3245 details

Gene Information

• Locus tag: Vapar_3245
• ID: 7973641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3420036
• End bp: 3420611
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644793830
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_002945129
• Protein GI: 239816219
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCCCG AAACCAAGCC CCGCTGCACC TGGGCCCAGA GCGATCCGCT GCTGGCCTCC 
TACCACGACG CCGAATGGGG CGTGCCCGAG CGCGACAGCC GCGCGCTGTG GGAAAAGCTC 
ATGCTCGACG GCTTCCAGGC GGGCCTCTCG TGGCTCACGA TCCTGCGCAA GCGCGATGCG 
TTCCGTGCTT CATTCGAGGG CTTCGTGCCC GAAAAAGTGG CACGGTTCAC CGCGGCCGAC 
GTCGACCGGC TGATGCTGGA CGCGGGCATC GTGCGCTCGC GCGCCAAGAT CGAGGCCACC 
ATCGGCAACG CCCGCGCCTA CCTGGCGATG CAAGCCGCGG GCGAGGATTT TTCGGAATTC 
GTCTGGGGCA TGGCCGGCGG CAAGCCGATC GTCAACAGGA CCGGCGCAGT GCCGACGAAG 
ACGCCGCTTT CGGAACAGAT GTCGGCGGCC CTGAAGAAGC GCGGCTTCAA GTTCGTGGGG 
CCGGTGATCG TCTATGCATG GATGCAGGCC ACCGGCATCG TCGACGACCA CGCACCCGAC 
TGCTTCTGCC ACCACGCCGC GCCGCGGCAG CGCTGA 

 

Protein sequence

MPPETKPRCT WAQSDPLLAS YHDAEWGVPE RDSRALWEKL MLDGFQAGLS WLTILRKRDA 
FRASFEGFVP EKVARFTAAD VDRLMLDAGI VRSRAKIEAT IGNARAYLAM QAAGEDFSEF 
VWGMAGGKPI VNRTGAVPTK TPLSEQMSAA LKKRGFKFVG PVIVYAWMQA TGIVDDHAPD 
CFCHHAAPRQ R