| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3208 |
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| Symbol | |
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| ID | 7973441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3385753 |
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| End bp | 3386724 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793793 |
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| Product | aldo/keto reductase |
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| Protein accession | YP_002945092 |
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| Protein GI | 239816182 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00561471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACT TCGGCCCGCC CGCTTTCTCG CCAGTTCCGT TTTTCGACGC GCGCTTGAAC
CGCGCACGCT TCCTGCAGCT TGTTGCAGTG CTGCCGATGA CCTCCGCGAT GACCGCGGCG
GCACAACACC TGCCAGCCAT CACGATGAAC ACCCGCCCCA TCCCCTCCAC GCAAGAAGCC
CTGCCGGTGG TCGGCTGCGG CACCTGGATC GGCTTCGACC AGCGCCCCGG CAGCGACGAA
TACCAGCGCC TGCCCGGCGT GCTGGACGCG CTGTTCGCGG CCGGCGGCAC GGTGATCGAC
AGCTCGCCGA TGTACGGCCG CTCCGAGGAA ACCACCGGCG AGCTGCTGGC CGCCGCAGCG
AAGCCGCGCG GGACCAAGGC CTTTCTCGCC ACCAAGGTCT GGACCTCGGG CCGCGAGGCC
GGCATCGCGC AGATGGAGCA GTCGTTCGCG CGGCTGCGCA CCCAGCGCAT GGACCTGATG
CAGGTGCACA ACCTGATGGA CTGGAAGACC CACTTGGCCA CGCTGCGCAA TTGGAAAGAA
AAAGGCCGCG TGCGCTACCT CGGCATCACG CACTACACGG CCTCGGCCTA CCGCGAAGTC
GAGGCCGTGC TGCGCGCCGA GAAGCTCGAC TTCCTGCAGA TCAACTATTC GCTCGACGCG
CGCGAGGCCG AGGAGCGCCT GCTGCCGCTC GCGGCCGAGC GCGGCGTGGC GGTGATCGTC
AACATGCCCT TCGGCGGCGG CGGGCTCTTG CGCCGGCTGC GCGACAAGCC GCTGCCCGCC
TGGGCCGGCG AGATCGGCTG CGCGAGCTGG GCGCAGGTGC TGCTGAAGTT CGTGCTGAGC
CACCCGGCCG TGACCTGCAC CATTCCCGGC ACCAGCCGCG CCGAGCACAT GGCCGACAAC
GCCGCGGCCG GCGCCGGCGC GTTTCCGGAT GCGGCGTTCT GGCGCCGCAA TGCAGCTTCG
GTCGAGCGCT GA
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| Protein sequence | MKNFGPPAFS PVPFFDARLN RARFLQLVAV LPMTSAMTAA AQHLPAITMN TRPIPSTQEA
LPVVGCGTWI GFDQRPGSDE YQRLPGVLDA LFAAGGTVID SSPMYGRSEE TTGELLAAAA
KPRGTKAFLA TKVWTSGREA GIAQMEQSFA RLRTQRMDLM QVHNLMDWKT HLATLRNWKE
KGRVRYLGIT HYTASAYREV EAVLRAEKLD FLQINYSLDA REAEERLLPL AAERGVAVIV
NMPFGGGGLL RRLRDKPLPA WAGEIGCASW AQVLLKFVLS HPAVTCTIPG TSRAEHMADN
AAAGAGAFPD AAFWRRNAAS VER
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