Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3207 |
Symbol | |
ID | 7973440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3383997 |
End bp | 3385538 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644793792 |
Product | hypothetical protein |
Protein accession | YP_002945091 |
Protein GI | 239816181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00101679 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGA CCTCCCGTTC CATCTCCCGC CTGCTGCACG GGCTCGTGCT GCTGCTGGCT GCACTGCTGC TGGCTGCATG CAGTGCTGCG CCGATCGCAC CCGAGCAGAC CCTCACGGGG CAGGAGGGGG CGGTGGTCAT GAAACTGATT ACCAACAGCC CTGGCGAGAC CGACCCGGCG GAGACGCTGT CGGCCGTGCG CCTCGAGCGC GTGCTCGAGT CCGGTGAAAA GCAGACCGGG CGCGACATCG TGGTGCTGAC GCGCACGCGC AAGGCCACCT ACACCACCGC TGTGTTCAGC GGCATGGTCG CGCCCGGGCG CTACATCATC AAGAGCATCA CCGGTGCGAG TGGCAACATG AGCTACTTCT ATCCCATCGA TGCGAAGTTC GGCAGCTTCG ACGTGGTGCG CGGCGAAGTC ACGCTGCTTG GAACGCTGTT GATCCAGCCG CGCCTGGGCA CGCGCTTTGT CGTTGCCTAT GTGCCACCGG AGGCTGAGCT GCAGAAGACC TTCGAGACCT TGTATCCCGC ATTGGCGGCG CAGACCCGCG GCCGTCCGCA GCATGGCTTC GTTCCCACGC TCGATCTCGA CCGCCGCGCT GCGTTGGCGC CGCAGGTCAA GCGCCTGGCG TCCATCTGGC ATGGCCTGAC GCAGACGGCC GACGGCGAAT TCATGGCCGG CAGCAAGCTC GGGAAGGTGC TGTGGCGCAA GAGCGGAGAG AGCCGTTGGA AGGAACTCGA CGTGGGTTCC TGGCGCGAGG TGCTCTCGGT CCGCCCCTAC CGCGGCGGGC TGCTGGCAGC GGGCGAGGAA GGCCTTCTGC GCCACTCTTC CGACGAGGGG TTGACTTGGA AGAGCCTGGT ACCGCCCGAT GACGGGCTGA TCCAACTGGC GCAGCCGATG CGCGACGGGG GCGTGGTTGC GATCTCGCGC CGCGACAGCC TCTGGACCGT CTACGCCTCG AAGGATCTTG ATGCCGGCGT GTGGCAAAAG CTCGGAGAGT TTTCCGATTC CCGCTCGATC AACGTGCCAT GGCAGCGCAG CATGAGCTTC GGCCAGCCGG AGCGCGCGGG CGTGATGATG CCCAACGGCG ACCTCCATGC CACCGATGGC CGCACGCTGT TTCGCTCCAG CAATGGTCGC TCCACCCTCG ACGTGAATGC CTTGCCCGAC GGCACCCTGG TGTCCCAGAC GGTGGTGATG ACAAAAACCA CCTTGCTTTC GCCCGATTGG GGGCAAACCT GGGCCGATCT CGACACCAGC CGTTTCGTCG TGACGATCGC CTTCAAGGAC CGGCAGACGG CATATGCGGT GGGCCCTGTC GCCCCCAGCC TGATGCCCGG AAAGCTGGGA TTGATGACCA CGCGGGACGG CGGCAGGAGC TGGTCACAGA CCGGCAGCTC GCCGGGAATG ACGAATCCCT ACGCCGTGCG CCAGATGATG GTGGACCGGG CCGATGGCTC TCTGATCGCC TTTCTGCCCG AAAACCTGAT CGTGCGGTCC ACGGACGAAG GAAAGAGCTG GAAGATCGTC AAGGACAACT GA
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Protein sequence | MNPTSRSISR LLHGLVLLLA ALLLAACSAA PIAPEQTLTG QEGAVVMKLI TNSPGETDPA ETLSAVRLER VLESGEKQTG RDIVVLTRTR KATYTTAVFS GMVAPGRYII KSITGASGNM SYFYPIDAKF GSFDVVRGEV TLLGTLLIQP RLGTRFVVAY VPPEAELQKT FETLYPALAA QTRGRPQHGF VPTLDLDRRA ALAPQVKRLA SIWHGLTQTA DGEFMAGSKL GKVLWRKSGE SRWKELDVGS WREVLSVRPY RGGLLAAGEE GLLRHSSDEG LTWKSLVPPD DGLIQLAQPM RDGGVVAISR RDSLWTVYAS KDLDAGVWQK LGEFSDSRSI NVPWQRSMSF GQPERAGVMM PNGDLHATDG RTLFRSSNGR STLDVNALPD GTLVSQTVVM TKTTLLSPDW GQTWADLDTS RFVVTIAFKD RQTAYAVGPV APSLMPGKLG LMTTRDGGRS WSQTGSSPGM TNPYAVRQMM VDRADGSLIA FLPENLIVRS TDEGKSWKIV KDN
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