Gene Vapar_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3207 
Symbol 
ID7973440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3383997 
End bp3385538 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content65% 
IMG OID644793792 
Producthypothetical protein 
Protein accessionYP_002945091 
Protein GI239816181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00101679 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGA CCTCCCGTTC CATCTCCCGC CTGCTGCACG GGCTCGTGCT GCTGCTGGCT 
GCACTGCTGC TGGCTGCATG CAGTGCTGCG CCGATCGCAC CCGAGCAGAC CCTCACGGGG
CAGGAGGGGG CGGTGGTCAT GAAACTGATT ACCAACAGCC CTGGCGAGAC CGACCCGGCG
GAGACGCTGT CGGCCGTGCG CCTCGAGCGC GTGCTCGAGT CCGGTGAAAA GCAGACCGGG
CGCGACATCG TGGTGCTGAC GCGCACGCGC AAGGCCACCT ACACCACCGC TGTGTTCAGC
GGCATGGTCG CGCCCGGGCG CTACATCATC AAGAGCATCA CCGGTGCGAG TGGCAACATG
AGCTACTTCT ATCCCATCGA TGCGAAGTTC GGCAGCTTCG ACGTGGTGCG CGGCGAAGTC
ACGCTGCTTG GAACGCTGTT GATCCAGCCG CGCCTGGGCA CGCGCTTTGT CGTTGCCTAT
GTGCCACCGG AGGCTGAGCT GCAGAAGACC TTCGAGACCT TGTATCCCGC ATTGGCGGCG
CAGACCCGCG GCCGTCCGCA GCATGGCTTC GTTCCCACGC TCGATCTCGA CCGCCGCGCT
GCGTTGGCGC CGCAGGTCAA GCGCCTGGCG TCCATCTGGC ATGGCCTGAC GCAGACGGCC
GACGGCGAAT TCATGGCCGG CAGCAAGCTC GGGAAGGTGC TGTGGCGCAA GAGCGGAGAG
AGCCGTTGGA AGGAACTCGA CGTGGGTTCC TGGCGCGAGG TGCTCTCGGT CCGCCCCTAC
CGCGGCGGGC TGCTGGCAGC GGGCGAGGAA GGCCTTCTGC GCCACTCTTC CGACGAGGGG
TTGACTTGGA AGAGCCTGGT ACCGCCCGAT GACGGGCTGA TCCAACTGGC GCAGCCGATG
CGCGACGGGG GCGTGGTTGC GATCTCGCGC CGCGACAGCC TCTGGACCGT CTACGCCTCG
AAGGATCTTG ATGCCGGCGT GTGGCAAAAG CTCGGAGAGT TTTCCGATTC CCGCTCGATC
AACGTGCCAT GGCAGCGCAG CATGAGCTTC GGCCAGCCGG AGCGCGCGGG CGTGATGATG
CCCAACGGCG ACCTCCATGC CACCGATGGC CGCACGCTGT TTCGCTCCAG CAATGGTCGC
TCCACCCTCG ACGTGAATGC CTTGCCCGAC GGCACCCTGG TGTCCCAGAC GGTGGTGATG
ACAAAAACCA CCTTGCTTTC GCCCGATTGG GGGCAAACCT GGGCCGATCT CGACACCAGC
CGTTTCGTCG TGACGATCGC CTTCAAGGAC CGGCAGACGG CATATGCGGT GGGCCCTGTC
GCCCCCAGCC TGATGCCCGG AAAGCTGGGA TTGATGACCA CGCGGGACGG CGGCAGGAGC
TGGTCACAGA CCGGCAGCTC GCCGGGAATG ACGAATCCCT ACGCCGTGCG CCAGATGATG
GTGGACCGGG CCGATGGCTC TCTGATCGCC TTTCTGCCCG AAAACCTGAT CGTGCGGTCC
ACGGACGAAG GAAAGAGCTG GAAGATCGTC AAGGACAACT GA
 
Protein sequence
MNPTSRSISR LLHGLVLLLA ALLLAACSAA PIAPEQTLTG QEGAVVMKLI TNSPGETDPA 
ETLSAVRLER VLESGEKQTG RDIVVLTRTR KATYTTAVFS GMVAPGRYII KSITGASGNM
SYFYPIDAKF GSFDVVRGEV TLLGTLLIQP RLGTRFVVAY VPPEAELQKT FETLYPALAA
QTRGRPQHGF VPTLDLDRRA ALAPQVKRLA SIWHGLTQTA DGEFMAGSKL GKVLWRKSGE
SRWKELDVGS WREVLSVRPY RGGLLAAGEE GLLRHSSDEG LTWKSLVPPD DGLIQLAQPM
RDGGVVAISR RDSLWTVYAS KDLDAGVWQK LGEFSDSRSI NVPWQRSMSF GQPERAGVMM
PNGDLHATDG RTLFRSSNGR STLDVNALPD GTLVSQTVVM TKTTLLSPDW GQTWADLDTS
RFVVTIAFKD RQTAYAVGPV APSLMPGKLG LMTTRDGGRS WSQTGSSPGM TNPYAVRQMM
VDRADGSLIA FLPENLIVRS TDEGKSWKIV KDN