Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3149 |
Symbol | |
ID | 7974359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3311153 |
End bp | 3312304 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644793733 |
Product | histidine kinase |
Protein accession | YP_002945033 |
Protein GI | 239816123 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.458506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGA GCCAATTCAT CAAAGACAAC ATCGAACCCA TCCTCGTCGA GTGGGAATCC TTTGCACGAA CGATGATCCC GCCGGCGGAG ACCATGTCCG TTGTCGAACT GCGGGACCAT GCGCATGAAA TCCTGCTGGC CATTGCCGGC GAAATGGAAT CGGCCCAGTC TGAAAGGCAG CGCGAAGCAA AGTCCAAGGG ACTTGCGCTG CCGTTCCTCA AGGAGACTTT TGCCGCCGAA CACGGTGGCC TGCGCCAGCG GGTGGGTTTC GACCTTTCCC AACTGGGCGC GGAATACCGC GCGCTGCGGG CCACGGTTCT TCGTTTGTGG ATGGGACACG TCGGCACGGT CGATGCCGCG GTCCTGGAAG AAGTGATGCG CTTCAACGAA GGCATCGACC AGGGCCTTGC CGAGGCCATG GCCACCTATT CGGAGCACGT GGCCAATTCC AGGGACACCT TCCTGGCCGT GCTGGGGCAC GACCTGCGAA ACCCGTTGAG CGCGCTCAGC TCCTGCATCC ATCTTCTCGA ACTGGCTGGC GAGGCCAGGC CCAAGGAGCG CACGCTCCAG ATCGCCAGGC GAAGCATTGC GTCGATCAAC GACATGGTCA CCGACCTGCT CGAGTACACG CGCACCCGGC TCGGCCGCGG CATCGAAGTG GTTCCACAGG AAGGCGACCT GAGTGCGCTG TGCCAGGAGG CCTTCGACGA GGTCTGCGCG GCCTATCCCA AGCGGGAGCT CGTCGCCGAG CTTCCAGCCG ATGTGGTGCT GATGTTCGAT GCGCCCAGGA TGCGCCAGGT CCTCACCAAC CTGCTGAGCA ACGCCGTGCA GCATGGAGAC CCCGCCCATC CCGTGGCGCT GGTGATCCGG GACGAGGGGG CGCATGCGAG CCTGATCGTC AAGAACCACG GAAGGCCGAT TCCCCCCGAT TCGATGCAGG TCATCTTCAA CCCGCTGGTG CAGGTTGCGA CACGCGAATC GGCGCCGCAC GAGCGGCCCG CCACGAGCCT GGGGCTGGGT CTCTACATTG CGCGGGAGAT CGTGACGGGG CACGGCGGCA CCATCACCGT GACCTCCTCC GCGGCGGAAG GCACGGCATT CACCGTTCAT CTGCCTCGCG GCGGCAAGCA GGCGACCCAG CCCGGCGGGT GA
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Protein sequence | MRLSQFIKDN IEPILVEWES FARTMIPPAE TMSVVELRDH AHEILLAIAG EMESAQSERQ REAKSKGLAL PFLKETFAAE HGGLRQRVGF DLSQLGAEYR ALRATVLRLW MGHVGTVDAA VLEEVMRFNE GIDQGLAEAM ATYSEHVANS RDTFLAVLGH DLRNPLSALS SCIHLLELAG EARPKERTLQ IARRSIASIN DMVTDLLEYT RTRLGRGIEV VPQEGDLSAL CQEAFDEVCA AYPKRELVAE LPADVVLMFD APRMRQVLTN LLSNAVQHGD PAHPVALVIR DEGAHASLIV KNHGRPIPPD SMQVIFNPLV QVATRESAPH ERPATSLGLG LYIAREIVTG HGGTITVTSS AAEGTAFTVH LPRGGKQATQ PGG
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