Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3132 |
Symbol | |
ID | 7974342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3291148 |
End bp | 3292074 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644793717 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002945017 |
Protein GI | 239816107 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.168013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCC GGCAACTGCG CTACTTCGTC AAGGTTTGCG AACTGCGCAG CATGGGCCGC GCGGCCGTCG AGCTGGGCGT GGTCACCTCG GCGCTGAGCC AGCAGATCAG CCGGCTCGAA GGCGAGCTTT CCACGCGCCT CTTGCAGCGC AGCTCGACCG GCGTGGTGCC CACCGATGCC GGCCTGGCCT TCTTGCAGCA GGCGCAGCTC ACGCTGCGCC ATGCCGACGA TGCCGTGCGC GCGGCGCAGC AGGCGCGCCT GTCGGGCCAT GTGAGCGTGG GCCTTGCGCC CACCACGGCC ACCGTGCTGG GCGTGCCGCT GATGCGCGCC ATGCAGCAGC GCTACCCCGA GGTGCGGCTG CACATGGTCG AGGCGCTGTC GGGCCATCTC ACGACGATGC TGCACGCGCG CCAGCTCGAC CTGGCGGTGC TGTTCCAGAC CGATACGCCG CGGCGCTGGA GCGTGGCGCC GCTCCTGGCC GAGAAGCTGT TCGTGATCGC ATCGCCGACG CTGGAGGGGC GCCCCACGGG CACCAAGGTC CGCCTGTCGC AGCTCGCCGA GGTGCCGCTG ATCCTGCCGA GCGGCAGCCA CGGCCTGCGC GCGACGCTGA TGGCGGCCTT TGCGCGGGCC TGCATCCAGC CGCGCATCGT TGCCGAGGTC GACGGCCTCG CGCTGCTGAT GGACGCGGTG CGCGCGGGCT ACGGCGCCAC CGTGCAGCCC GGCGCCGCCA CGGCCCGGCA TGACCGCGAC GACCTGGAGC TCACGCAGAT CAGCGATGCG CACGTGGGCC GCCGCAACCT GCTCGTGAGC CTGTCGGACG ACGAGCTTTC GCCGGCCGCT CTGGCCGCGC GCGTGGTGGT TGCCGACACG GCGCGCGCCC TGGTGCGCGA GGGGCGATGG GCCGGGGCCA GTCTTCTCGA AAGCTGA
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Protein sequence | MELRQLRYFV KVCELRSMGR AAVELGVVTS ALSQQISRLE GELSTRLLQR SSTGVVPTDA GLAFLQQAQL TLRHADDAVR AAQQARLSGH VSVGLAPTTA TVLGVPLMRA MQQRYPEVRL HMVEALSGHL TTMLHARQLD LAVLFQTDTP RRWSVAPLLA EKLFVIASPT LEGRPTGTKV RLSQLAEVPL ILPSGSHGLR ATLMAAFARA CIQPRIVAEV DGLALLMDAV RAGYGATVQP GAATARHDRD DLELTQISDA HVGRRNLLVS LSDDELSPAA LAARVVVADT ARALVREGRW AGASLLES
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