| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3127 |
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| Symbol | |
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| ID | 7974337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3286822 |
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| End bp | 3287580 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793712 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_002945012 |
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| Protein GI | 239816102 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.304913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC CCGACACCGT GCCCCACGAT TCCACGCCCG ACGACGACGA CGACGCGGCC
GACGACAACA GCAACAAGCC GCCGCATCCG CTGCACCGCC GCCTCAAGAG CTTCGTGAAG
CGCGCGGGCC GCACCACCGA CGGCCAGGCG CGCGCCTTTG CCGAGCTGGG CCCGCTGTTC
CTCATTCCCT ACAAGCCCGA GCCGCTCGAC CTGACGGCGG CCTTCGGCGG CCGCGCCGCG
CCGACCGTGC TCGAGATCGG CTTTGGCATG GGCGAGGCCA CCGCGCACAT CGCCACGGTG
CTGCCCGAGA CCAACTTCCT GTGCTGCGAA GTGCACGAGC CCGGCGTGGG CGCGCTGCTC
AAGCGCATCG GCGAGCAGTC GATCAGCAAC ATCCGCATCT GCGCGCACGA TGCGGTCGAC
GTGCTCGACC ACATGCTGCA GCCCGGCTCG CTGGCGGGCG TGCATGTGTT CTTTCCCGAC
CCGTGGCACA AGAAGCGCCA CAACAAGCGC CGCCTGATCC AGCCCAAGTT CGTGAAAAAG
CTCGCCGAAC ACCTGCAGCC GGGCGGCTAC ATCCATTGCG CCACCGACTG GCAGCCCTAC
GCCGAGCAGA TGCTCGAGGT GCTGTCCGCC GAGCCGCTGC TGCGCAACAC GGCCGAAGGC
TACGCACCCA AGCCCGAGTA CCGGCCGCTC ACCAAGTTCG AGAACCGCGG CATCAAGCTG
GGCCACGGCG TCTGGGACCT GGTGTTCCGG CGCGCCTGA
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| Protein sequence | MTFPDTVPHD STPDDDDDAA DDNSNKPPHP LHRRLKSFVK RAGRTTDGQA RAFAELGPLF
LIPYKPEPLD LTAAFGGRAA PTVLEIGFGM GEATAHIATV LPETNFLCCE VHEPGVGALL
KRIGEQSISN IRICAHDAVD VLDHMLQPGS LAGVHVFFPD PWHKKRHNKR RLIQPKFVKK
LAEHLQPGGY IHCATDWQPY AEQMLEVLSA EPLLRNTAEG YAPKPEYRPL TKFENRGIKL
GHGVWDLVFR RA
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