| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3124 |
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| Symbol | |
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| ID | 7974334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3283713 |
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| End bp | 3284666 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793709 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945009 |
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| Protein GI | 239816099 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.151908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCG CCAGAGACGT ACTGACCCCC GATGCGCTCG CCATGCTGCA GACCGTGGCG
AGCACCGGCA GCTTTGCCGG CGCGGCGCGC GCGCTCAACC TCGTGCCCAG CGCGCTCAGC
TACCGCGTGC GCCAGATCGA GGACGCGCTC GACGTGCTGC TGTTCGACCG CAGCGCACGC
CAGGCCCGCA TCACCGAGGC CGGCGCCGAG CTGCTGCGCG AGGCGGCGCG GCTGCTCGGC
GAGATCGATG CGGTGGCCAA CCGCGTCAAG CGCGTGGCCA CCGGCTGGGA GCCGATGCTC
ACCATTGCGG TCGACAGCGT GATCGCGCGC GACCCGCTGC TCGACCTGGC CACGGCCTTC
TTCGCGCTCG ATCCGCCCAC GCGGCTCAAG CTGCGCGACG AAACCCTGCT CGGCACCATC
GAGGCGCTGA CCAGCGGCGA GGCCGACCTG GCCATTGGCG CGGTGCTCGA CGCGGCGAGC
CTGGCCTTCA CCGCCACCGG CATCCGCAGC CGGCCGATCG GCGAGCTGTG CTTTGTCTAT
GCAGTGGCGC CGCACCATCC GCTCGCGCGC CTGCCCGAGC CATTGACCGA TGCGGTGCTT
CGCCAGCATC GCGCGGTGGC CGCGGCCGAC TCGGTGCGCA GCGGGCCGAG CATGACGGTC
AACCTGGTCG GTGGACAGGA CGTGCTCACG GTGCCGAGCA TGCAGGCCAA GCTGAACGCG
CAGCTGCACG GCCTGGGCGG CGGCTTCCTT CCCGAGCCGA TGGCGCGGCC CTACATCGAG
GCCGGCCACC TGGTCGAGCG CAAGACCGAA CGCCAGCCGC CGCTCGCGAC CATGCACTGC
GCCTGGCGCG TGCGCAGCGC GGGCGGACCG GGCCGCGCAC TCGAATGGTG GCTCGCGCAG
TTCGAGCACG AGGCCACGCG GCGGGCTCTG CTCGAACGGC ATCGCGGGCG TTGA
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| Protein sequence | MPSARDVLTP DALAMLQTVA STGSFAGAAR ALNLVPSALS YRVRQIEDAL DVLLFDRSAR
QARITEAGAE LLREAARLLG EIDAVANRVK RVATGWEPML TIAVDSVIAR DPLLDLATAF
FALDPPTRLK LRDETLLGTI EALTSGEADL AIGAVLDAAS LAFTATGIRS RPIGELCFVY
AVAPHHPLAR LPEPLTDAVL RQHRAVAAAD SVRSGPSMTV NLVGGQDVLT VPSMQAKLNA
QLHGLGGGFL PEPMARPYIE AGHLVERKTE RQPPLATMHC AWRVRSAGGP GRALEWWLAQ
FEHEATRRAL LERHRGR
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