| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3122 |
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| Symbol | |
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| ID | 7974332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3282333 |
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| End bp | 3282752 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793707 |
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| Product | DoxX family protein |
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| Protein accession | YP_002945007 |
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| Protein GI | 239816097 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2259] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.461418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACCA CAACCACCAC CCCCAATGCA GCCCAGGACA CGCTGGCGCT GGTCGGCCGC
ATCCTGATCG CGTACCTGTT CATCCCGGCC GGCATCGGCA AGCTCATGGG CTTTGCGGGC
ACCGTGGGCT ACATCAACTC GGTGGGCCTG CCGCTGCCGG AAGTGGCGGC CGCGATCGCC
ATCCTGGTCG AGCTCGTCCT CGGCATCGCG CTGCTGGTGG GCTTCAAGAC CCGCTGGACC
GCCATTGCGA TGGCCGTCTT CACCGTGGTC ACCGCGCTGT TCTTCCACAA GTACTGGTCG
GCGCCCGATG CAATGAAGAT GATGCAGCAG ATCAACTTCA ACAAGAACAT CGCCATTGCG
GGCGGCCTGC TCGCCTTCGC CGCCTTCGGC CCCGGCCGCT TCAGCATCGA CAAGCGCTGA
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| Protein sequence | MATTTTTPNA AQDTLALVGR ILIAYLFIPA GIGKLMGFAG TVGYINSVGL PLPEVAAAIA
ILVELVLGIA LLVGFKTRWT AIAMAVFTVV TALFFHKYWS APDAMKMMQQ INFNKNIAIA
GGLLAFAAFG PGRFSIDKR
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