| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3116 |
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| Symbol | |
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| ID | 7974326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3274981 |
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| End bp | 3275418 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793701 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_002945001 |
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| Protein GI | 239816091 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.243499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCGCAG TTTCATCCCG GGGCCGAGGC CGCCGCACGA TCAACGAGAT CAACATGGTC
CCGTTCATCG ACGTGATGCT GGTGCTGCTG ATCATCTTCA TGGTCACCGC GCCGCTCATC
ACGCCGAGCG TGATCAACCT GCCCTCCGTC GACCGTGCCA ACAAGCAGCC CGACAAGCCC
ATCGAGATCG TCATCAAGAG CGATGACGAA GCGCAGATCA AGAAGGACCC GTCCACCGGC
AGCGGCGGCA CCTCCGTTCC CATGACCCAG ATCGGCTCCG CGGCCAAGAC CGCCCAGGGC
GGCGACGACC AGCGCCCGGT GGTCATCAGC GCCGACAAGT CCGTGAAGTA CGAAACCGTC
GTGAAGGCGA TGAACCAGCT CAAGCGCAGC GGCATCGAGC GCGTGGGCCT GTCCGTCACC
ACCACGGGCG GCAAATAA
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| Protein sequence | MPAVSSRGRG RRTINEINMV PFIDVMLVLL IIFMVTAPLI TPSVINLPSV DRANKQPDKP
IEIVIKSDDE AQIKKDPSTG SGGTSVPMTQ IGSAAKTAQG GDDQRPVVIS ADKSVKYETV
VKAMNQLKRS GIERVGLSVT TTGGK
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