| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3093 |
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| Symbol | |
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| ID | 7974303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3249525 |
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| End bp | 3250037 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644793678 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_002944978 |
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| Protein GI | 239816068 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.364812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAACC CCAAAGTCGA ACTCCACATC AAGAACTACG GCGTGATCAC GCTCGAACTC
GACAGCGCCA AGGCGCCGAA GTCGGCCGAG AACTTCGTCA ACTATGTGAA GAACGGTCAC
TACGACAACA CGGTGTTCCA CCGCGTGATC CCGGGCTTCA TGGTGCAAGG CGGCGGCTTC
GAGCCCGGCA TGAAGCAAAA GCCCACCGGC GCCGAGATCG AGAACGAAGC CAACAACGGC
CTCAAGAACG ACAACTACAC CGTCGCCATG GCGCGCACCA GCGCACCGCA CTCGGCCACC
GCCCAGTTCT TCATCAACGT GGCCGACAAC GGCTTCCTGA ACCACACCGC GCCCTCGGCC
CAAGGCTGGG GCTACGCGGT GTTCGGCAAG GTCACCGGCG GCACCGACGT GGTGGACAAG
ATCAAGGCCG TGAAGACGGG CCGCAAGGGC TTCCACGACG ACGTGCCGCT CGAGGACGTG
GTCATCGAGA AGGCCGTCCT CGTCGCGGAA TAA
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| Protein sequence | MSNPKVELHI KNYGVITLEL DSAKAPKSAE NFVNYVKNGH YDNTVFHRVI PGFMVQGGGF
EPGMKQKPTG AEIENEANNG LKNDNYTVAM ARTSAPHSAT AQFFINVADN GFLNHTAPSA
QGWGYAVFGK VTGGTDVVDK IKAVKTGRKG FHDDVPLEDV VIEKAVLVAE
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