Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3088 |
Symbol | |
ID | 7974298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3244980 |
End bp | 3245960 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644793673 |
Product | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
Protein accession | YP_002944973 |
Protein GI | 239816063 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0825] Acetyl-CoA carboxylase alpha subunit |
TIGRFAM ID | [TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGAAAC GAACCTTCCT CGACTTCGAG CAGCCCATTG CTGAACTCGA AACAAAGATC GAAGAACTGC GCTATGTACA GACCGAATCG GCGGTCGACA TCTCGGAGGA AATCGACCAG CTCGGCAAGA AGAGCCAGCA GCTCACCAAG GACATCTACA GCGACCTGAC GCCCTGGCAG ATCACCAAGA TCGCGCGGCA TCCGGAGCGG CCCTACACGC TCGACTACGT CAACGAGATC TTCACCGACT TCGTCGAACT GCACGGCGAC CGGCACTTTT CGGACGACCT CTCCATTGTG GGCGGCCTGG CGCGCTTCAA CGGCACGCCC TGCATGGTGC TCGGCCACCA GAAGGGGCGC GACACCAAGG AGCGCACCGC GCGCAACTTC GGCATGAGCA AGCCCGAGGG CTACCGCAAG GCGCTGCGCC TCATGAAGAC GGCCGAGAAG TTCAAGCTCC CGGTCTTCAC CTTCGTCGAT ACGCCCGGTG CCTATCCGGG CATCGACGCC GAGGAGCGCG GCCAGTCCGA AGCCATCGGC CGCAACATCT ACGAGATGGC GCAGCTCGAG GTGCCGATCA TCGTCACCAT CATTGGCGAA GGCGGCTCCG GCGGCGCGCT GGCCATTTCG GTGGGCGACC AGCTCGTGAT GCTGCAGTAT TCGATCTACT CGGTCATCAG CCCCGAAGGC TGCGCCTCCA TTCTCTGGAA GACCAGCGAC AAGGCGCAGG AAGCGGCCGA TGCCCTCGGC ATCACGGCGC ACCGCCTGAA GGCGCTGGGC CTGGTCGACA AGATCGTGAA CGAACCGGTC GGCGGCGCGC ACCGCGACCA CCGCCAGATG GCCGCTTTCC TCAAGCGCGC GCTCAACGAC GCCTTCCGCC AGGTCAGCGA CCTGAAGCCG AAGGAACTGC TCGAGCGCCG CTACGAACGC CTGCAGAGCT ACGGGCGCTT CAACGACACC AAGGCCGACA CCGGCAGGTA A
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Protein sequence | MAKRTFLDFE QPIAELETKI EELRYVQTES AVDISEEIDQ LGKKSQQLTK DIYSDLTPWQ ITKIARHPER PYTLDYVNEI FTDFVELHGD RHFSDDLSIV GGLARFNGTP CMVLGHQKGR DTKERTARNF GMSKPEGYRK ALRLMKTAEK FKLPVFTFVD TPGAYPGIDA EERGQSEAIG RNIYEMAQLE VPIIVTIIGE GGSGGALAIS VGDQLVMLQY SIYSVISPEG CASILWKTSD KAQEAADALG ITAHRLKALG LVDKIVNEPV GGAHRDHRQM AAFLKRALND AFRQVSDLKP KELLERRYER LQSYGRFNDT KADTGR
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