| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3058 |
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| Symbol | |
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| ID | 7973778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3214751 |
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| End bp | 3215740 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793642 |
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| Product | Prolyl aminopeptidase |
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| Protein accession | YP_002944943 |
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| Protein GI | 239816033 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.39846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTCCCA ACGGCCTGTA CCCCGAATCT CCTCCCTGGC GCACCCACGC ATTGGAGGTG
CCGCATGGCC ATGTGCTGCA TGTAGAAGAA GGTGGCAACC CGGAAGGCAT CTGCGCCGTG
GTCCTGCACG GCGGGCCCGG CTCGGGCAGC TCGCCGCTGC TGCGGCGCTT CTTCGATCCG
GCGCGCTACC GCGTGATCAG CATCGACCAG CGCGGCGCCG GTCGAAGCCG CCCGCGCGGC
GCGACGGTGC ACAACCGCAC GGCCGACCTG CTCGACGACC TGCGCCGCGT GCGCGAGCAA
CTCGGCGTGC CGCGCTGGCT GGTGGTCGGC GGCTCGTGGG GCGCCACGCT GGCGCTGGCC
CATGCGGCCT TCGAGCCACA AGCGGTGGCG GCGCTGCTGC TGCGCGCGGT GTTCCTGCCG
AGCGCCGAAG AGATCGACAC CTTCTTCCAG GACAGCGCCG GCCGCGCACC CGCCGCCTGG
GCGCGCTTCG CGTCGGTGGC ACCGGCCGGC GAGCGCCATG ACATGCTGGG TTTCCTGGCC
CGCGGGCTGC AGCAAGCGCC GGCCGATGGC GTCCACCAGC TCGCGCTCGC CTGGTGGCGC
TGGGAGCAGA CGCTGGCGCG CGGCGCGGGC GCCGCAACCG GCGAGCCGCC GACCGACGAA
CCCGAGCGCG AAACGCTCGA CGCACAGGTC GACCGCTACC GCGTGCAGAG CCACTACCTG
CTGCACCGCT GCTGGCTCGA TGCGCCCCCG CTGCTGGACC GCCTGGCCGC GCTGCCGCGC
GTGCCCACCC TGCTGCTGCA TTCGCGCGAC GACCGCATCT GCGCGCCGCA GGGCGCACAG
GCCGTGCACG ACCGCATTCC GCACAGCCTG CTGCAATGGA TCGACGGCGC GGGCCACGAC
CCCACGCACC CGGCCATGGC CTCCGCCATG GTCGCCGCGC TCGACAGCTA CGCGCAGCAC
GGCCATTTCG GCAACGCATC CGCACCATGA
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| Protein sequence | MLPNGLYPES PPWRTHALEV PHGHVLHVEE GGNPEGICAV VLHGGPGSGS SPLLRRFFDP
ARYRVISIDQ RGAGRSRPRG ATVHNRTADL LDDLRRVREQ LGVPRWLVVG GSWGATLALA
HAAFEPQAVA ALLLRAVFLP SAEEIDTFFQ DSAGRAPAAW ARFASVAPAG ERHDMLGFLA
RGLQQAPADG VHQLALAWWR WEQTLARGAG AATGEPPTDE PERETLDAQV DRYRVQSHYL
LHRCWLDAPP LLDRLAALPR VPTLLLHSRD DRICAPQGAQ AVHDRIPHSL LQWIDGAGHD
PTHPAMASAM VAALDSYAQH GHFGNASAP
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