| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3037 |
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| Symbol | |
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| ID | 7973757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3196465 |
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| End bp | 3197646 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793621 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944922 |
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| Protein GI | 239816012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.245994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGACGC GCGCAACGGC TTCCTGGCTG GTGGGCGCGT GGTGGATGGC CGTGGCGCTC
GTGGCGCCGG CGGCGGCGGG CGCGGCCGTG CTCAAGGCCA CGCTGATCAC GCCGGACGAC
GATCCCCGCC TGGAGCGTTC CCGCGTGGAG CGTGCCTACC TGGGGCACCC GGGCGGCCCG
CTTTCCGATG GGCTCGAAGT TGCGCTCGAG GAGACGAAGT TCGAACTCGA GGCCGCCGGC
GCCGAAGTGG CGCTGGCCAG CGCGCCTGCC GCGACCCTCG AGGCCGCGCG CGCCGCGGCG
GTGGCGGCCG AGAAGAGCGG CGCGGCGGTG CTGCTGACCG ACCTGCCGGC CGAATGGACG
CTGGCCGTGG CCGATGCCGT GAAGCTGCCG GTGCTGAACC TGGGCGACGC CTCCGACCGG
CTGCGCCAGC AGGATTGCCG CGCACGCGTG TTCCATTTGA TTCCCAGCGA ACGCATGCGC
AGCGATGCGC TGGCGCAGAC GCTGGTGTCG CGCAAATGGA GCAAGCTGCT CCTGCTGGTG
GGCGGCAGCC CGCAGGACGC GCTGCGCGCG GCCACCGTGC AGGCGTCGAT CAAGCGCTAC
GGCCTGCAGG TGGTGGCCAG CAAGCCGTTC AAGCTCTCGG CCGATCCGCG CGAGCGCGAC
CTCGCCAACC CGCTGCTGCT CACGGCCGGC AACAACTACG ACGCCGTGTG GGTGGTCGAC
AGCGACGGCG AGTTCGCCCG CATGCTGCCC TACCGCACCG TGCTGCCGCG GCCGGTGGTG
GGCGACGGCG GGCTGGTGGC GCTGGCCTGG CATGCGCAGT TCGAGCGCTA TGGCGCGCCG
CAGGTCTCGC GCCGCTTTGC CAAGGCCGCA AAGCGCCCGA TGACCGCGCA GGACTGGGCC
GCCTGGATGG CCGGCAAGAC CCTGGCGGCC GTGGCCATTG CCGCGCCCAA GGGCCCGAAC
GCAGCCTGGG CCCAGGCCAT CGGCAAGAGC ACGCTCGACG GCTCCAAGGG CACCAGCCTG
AGCTTCCGCG CCTGGGACGG CCAGTTGCGC CAGCCCATGC TGCTGACGGA CGGGCAGGGC
GTGATCGCGC AGGCGCCGGC CGAAGGCGTG CTGCACCCGC GCAACGTGCT CGACACGCTG
GGCGCCGATG CACCGGAGAA GCTATGTCCG ATCGCGCGCT AG
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| Protein sequence | MRTRATASWL VGAWWMAVAL VAPAAAGAAV LKATLITPDD DPRLERSRVE RAYLGHPGGP
LSDGLEVALE ETKFELEAAG AEVALASAPA ATLEAARAAA VAAEKSGAAV LLTDLPAEWT
LAVADAVKLP VLNLGDASDR LRQQDCRARV FHLIPSERMR SDALAQTLVS RKWSKLLLLV
GGSPQDALRA ATVQASIKRY GLQVVASKPF KLSADPRERD LANPLLLTAG NNYDAVWVVD
SDGEFARMLP YRTVLPRPVV GDGGLVALAW HAQFERYGAP QVSRRFAKAA KRPMTAQDWA
AWMAGKTLAA VAIAAPKGPN AAWAQAIGKS TLDGSKGTSL SFRAWDGQLR QPMLLTDGQG
VIAQAPAEGV LHPRNVLDTL GADAPEKLCP IAR
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