| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3033 |
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| Symbol | |
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| ID | 7973753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3191279 |
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| End bp | 3192256 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793617 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002944918 |
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| Protein GI | 239816008 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0089298 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTTT CCAAGCACGC GAGCTTCAGG CAGCTCGCCA CCTTCCACGC CGTGGCGCGG
CTCGGCAGCG TTTCACTTGC TGCAGATGAA ATGCACCTGA CGCAACCCGC GGTGTCGATA
CAGATCGGCA CACTCGAGGA GTCGGCCGGC ACGCCGCTTT TGCAGCGCAC GGGCCGCGGC
ATCCGGCTGA CCGAGGCAGG CGAATTGCTG GCGGGCTATG CCGGCCGCAT CCTCGACCTG
TGGCGCGAGG CCGGCGACGA AATGGCGATG CTGCAAGGCG TGTTCTCGGG CACCTTGCGC
GTGGGCGCCA TCACCACGGC CGAGTACCTG CTGCCGCCCA TCCTGGTGAA CTTCGCCAAG
GAGCATCCGA AGGTGAAGGT CAAGCTGCAG GTCGGCAACC GCGACGAGAT CGTGCGCATG
CTCGCGGGCC AGGAGATCGA CATCGCCATC ATGGGCCGAC CGCCCGCAGA ACTGAAGACC
GACTCCAGCG CCTTCGCCAA GCACCCGATG GCCTTTCTCG CGGCGCCTTC GCACCCGCTG
ATGTCCGCGG CCAAGCCGAG CATCGCCCTG CTCTCGGACA CGCGCATGCT GGTGCGCGAG
CGCGGCTCGG GCACGCGCAC CACGGTCGAG CGCTTCTTCA AGGACCACGG CCTGCCGCTG
CGCATCGGCT CCGAGCTGTC GAGCAACGAG GCCATCAAGC AGATGTGCGC CGCGGGCTTC
GGCATTGCCT TCTTGTCGAT GCACACCTGC GTGCTCGAGA TGAACGCCGG CCTGCTGGGC
GTGCTGCCGG TGCCGGGCAA TCCGGTGGTG CGCGACTGGT ACGTGATGCA CCTCGCGTCG
CGGCAATTGC CGCAGGTGGC GCTGGCCTTC GAAGAATATT TGCGCACGCA TGGCCAGGCG
CAGATCCAGC AGCAGCTCGG CACGCTGCCG GCGGCGCGTA CCGCGGCCAG GAAACGCAGC
GTGCGGCGCG CGGCCTGA
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| Protein sequence | MPLSKHASFR QLATFHAVAR LGSVSLAADE MHLTQPAVSI QIGTLEESAG TPLLQRTGRG
IRLTEAGELL AGYAGRILDL WREAGDEMAM LQGVFSGTLR VGAITTAEYL LPPILVNFAK
EHPKVKVKLQ VGNRDEIVRM LAGQEIDIAI MGRPPAELKT DSSAFAKHPM AFLAAPSHPL
MSAAKPSIAL LSDTRMLVRE RGSGTRTTVE RFFKDHGLPL RIGSELSSNE AIKQMCAAGF
GIAFLSMHTC VLEMNAGLLG VLPVPGNPVV RDWYVMHLAS RQLPQVALAF EEYLRTHGQA
QIQQQLGTLP AARTAARKRS VRRAA
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