| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3030 |
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| Symbol | |
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| ID | 7973750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3188271 |
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| End bp | 3189203 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793614 |
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| Product | CbbX protein |
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| Protein accession | YP_002944915 |
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| Protein GI | 239816005 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00687874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCA CCGAAACCCC CGCCACCACG GCCGCTGTCG CGACCGCGCC GAGGCAGCTC
TTCGAGTCCT CGGGCGTGAA GGCGCTGCTC GACCAGCTCG ACGCCGAGCT GATCGGGCTG
GCGCCGGTCA AGGGCCGCAT CCGCGACATC GCGGCGCTGC TCTTGATCGA CAAGCTGCGC
CAGGAACAGG GGCTGCAGTC GCAGCCGCCT TCGCTGCACA TGTCGTTCAC GGGCAACCCG
GGCACCGGCA AGACCACGGT GGCGATGCGG ATGGCCGAGG TGCTCAAGCA ACTGGGCTAC
GTGCGCAAGG GCCACCTGGT GGCGGTGACG CGCGACGACC TGGTGGGCCA GTTCATCGGC
CACACGGCGC CCAAGACCAA GGAAGTGATC AAGAAGGCGA TGGGCGGCGT GCTGTTCATC
GACGAGGCCT ACTACCTCTA CCGGCCCGAG AACGAGCGCG ACTACGGGCA GGAGGCCATC
GAAATCTTGC TGCAGGTGAT GGAGAACCAG CGCGACGACC TGGTGGTGAT TCTTGCGGGC
TACAAGGACC GCATGGAGAC CTTCTTCGGC AGCAACCCGG GCATGGCCTC GCGCATTGCG
CACCACATCG ACTTTCCGGA CTACAGCGAG GCCGAGCTGA TGCAGATCGC GCAGCTCATG
CTGGGGCGGC TGAACTACAG CTTCGACGAC GGCGCGGCCT CCACCTTCTC GCGCTACGTG
AGCCTGCGCC GGCAGCAGCC GCACTTTGCC AATGCGCGCT CGATCCGCAA CGCGCTCGAC
CGCATCCGGC TGCGCCACGC CACGCGCCTG TTCGGCAGCG ACGCGGCGCT GACGCGCGAG
CAGCTCTGCA CGCTGCAGGC GCAGGACATC CTGGCCAGCC GCGTCTTCCA TCCGGCGGCG
GATGCCGCGC AGGCCGAAGG AGAAAAGAGA TGA
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| Protein sequence | MDATETPATT AAVATAPRQL FESSGVKALL DQLDAELIGL APVKGRIRDI AALLLIDKLR
QEQGLQSQPP SLHMSFTGNP GTGKTTVAMR MAEVLKQLGY VRKGHLVAVT RDDLVGQFIG
HTAPKTKEVI KKAMGGVLFI DEAYYLYRPE NERDYGQEAI EILLQVMENQ RDDLVVILAG
YKDRMETFFG SNPGMASRIA HHIDFPDYSE AELMQIAQLM LGRLNYSFDD GAASTFSRYV
SLRRQQPHFA NARSIRNALD RIRLRHATRL FGSDAALTRE QLCTLQAQDI LASRVFHPAA
DAAQAEGEKR
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