| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3010 |
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| Symbol | |
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| ID | 7973730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3167136 |
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| End bp | 3168095 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793595 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944896 |
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| Protein GI | 239815986 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.770654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGCG ACACCTTTTT GAAGTCATTG GCCGCGCTGG CCGCCGCCGG AGCCCTGCCG
TTGTCGGCAC GCGCCGCAGC CAACGTCAAG ATGATGATTC CAGCCAACCC GGGCGGCGGC
TGGGATACCA CGGGCCGCGC GCTGGGCAAG GCAATGACCG AATCCAAGCA GGCCGACACG
GTCACCTACG ACAACAAGGG CGGCGCCGCC GGCGCGCTGG GCCTGGCCCA GTTCGTGAAC
GGCTCCAAGG GCGATCCGAA CGCGCTCATG GTCATGGGCT CCGTCATGCT CGGCGGCATC
ATCACCGGCA AGCCGCCGGT CAACCTCTCG CAGGCCACGC CAATTGCGCG CCTGACCACC
GAATACAACG TGTTCGTGCT GCCGGCCAAT TCGCCCTTCA AGACCATGAA GGACGTGGTC
GAGCAGCTCA AGAAGGACCC GGGCAGCGTC AAGTGGGGCG GCGGTTCGCG CGGTTCCACC
GAGCACATTG CCGCGGCCAT GATCGCGCAG AAGGTCGGCG CCGATCCGTC CAAGATCAAC
TACGTGGCCT TCCGCGGCGG CGGCGAAGCC ACGGCCGCCA TCCTGGGTGG CAACGTCACC
GTCGGCGGCA GCGGCTACAG CGAGTTCGCC GAGTACATCG CCGCCGGCAA GATGAAGCCC
ATTGCGGTCA CCTCGGCCCA GCGCCTGCCG GGCATCAACG TGCCCACGCT CAAGGAGCAG
GGCATCGACG TGGAGATTGG CAACTGGCGC GGCGTGTATG GCGCCCCCGG CATCAGCGCC
GAGCAGCGCA AGGCGCTGAC CGACATGGTG CTGGCCGCGC TCAAGAGCCC GTCGTGGGCC
GAATCGCTCA AGAAGAACGA CTGGACGCCG GCCGTGCTGT CGGGCGACGC CTTTGCCAAG
TTCGTCGACG ACGACTTCGC GAGCCTGCGC GCGATCATGG CCAAGTCCGG GATGATCTGA
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| Protein sequence | MRRDTFLKSL AALAAAGALP LSARAAANVK MMIPANPGGG WDTTGRALGK AMTESKQADT
VTYDNKGGAA GALGLAQFVN GSKGDPNALM VMGSVMLGGI ITGKPPVNLS QATPIARLTT
EYNVFVLPAN SPFKTMKDVV EQLKKDPGSV KWGGGSRGST EHIAAAMIAQ KVGADPSKIN
YVAFRGGGEA TAAILGGNVT VGGSGYSEFA EYIAAGKMKP IAVTSAQRLP GINVPTLKEQ
GIDVEIGNWR GVYGAPGISA EQRKALTDMV LAALKSPSWA ESLKKNDWTP AVLSGDAFAK
FVDDDFASLR AIMAKSGMI
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