| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2922 |
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| Symbol | |
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| ID | 7972198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3070719 |
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| End bp | 3072572 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793507 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002944808 |
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| Protein GI | 239815898 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGC GTCCCACCCT CGACTTCCTG CTTTACGACT GGCTCGACGC GGAATCGCTG
AGCCAGCGCG AGCGTTTCTC GGACCACTCG CGCGAGACCT TCGATGCGGT GCTCGACACC
TGCGAACGCA TTGCGCGCGA AAAGTACGCG CCGGCCAATC GCATCGTCGA CACGCAGGAG
CCGCATTTCG ACGGCGAGAA GGTGGTGCTG CCGCAGGCCA CGCATGACGC GCACAAGGCC
TTTGTCGAGT CGGGAATGAT GAGCGCGGCG CAGGACTACG ACATCGGCGG CATGCAGCTG
CCCTACACGC TGCAGGCCGC GGCCAACAGC TTCTTTGCGA TGGCGTCGGT CAGCATCGGC
TCGAACATGC TCACGAGCGG CAACGCCAAC CTGCTGATGG TGCACGGCAC CGAGATGCAG
AAGGAAGTGT TCGCCAAGAA CGAGTTCTCG GGCCGCTGGG CCGGCACCAT GTGCCTGTCC
GAGCCGCAGG CCGGCTCCTC GCTGAGCGAC GTGGCCACGC GCGCCGTGCC CGATGGCGAC
GGCTACCAGG GCGATCCGCT CGGGCCGCGC TATCGGCTCA CGGGCAACAA GATGTGGATA
TCGGCGGGCG ACCATGAGCT CACCGAGAAC ATCGTGCACA TCGTGCTCGC AAAGATTCCG
GATGCGAATG GCAAGCTGGT GCCGGGCACG CGTGGCATCT CTCTGTTCAT TGTGCCCAAG
CGCATGGTGA ACACCCAAGG CGAGTTGACC GGCGAGCGCA ACGACGTGGC GCTCGCAGGC
CTCAACCACA AGCTCGGCTG GCGCGGCACC ACCAACACGC TGCTGAACTT CGGCGAGGGC
AAGTACCCGG TCGGCGGCAA GGCGGGTGCG GTGGGCTACC TGGTCGGCGA GCCCGGCAAG
GGCCTGCACT GCATGTTCCA CATGATGAAC GAGGCGCGCA TCGGCGTCGG CACGGCCGCC
ACCATGCTGG GCATGGCCGG CTATTACGCC TCGCTCGACT ATGCGAAGAC GCGGCCGCAG
GGCCGGCTCG TGAAGAAGGC GGAGCAGCCC GGCACGGCGG TCGCCAAGGA CTCGGCCAGC
CCGCAGGTGC GCATCATCGA GCATGCCGAC GTGCGCCGCA TGCTGCTTGC GCAGAAAGCG
TACTGCGAAG GCGCGCTGGC GCTGGAGCTG TACTGCGCGC GGCTGGTCGA CGAGCAGAAG
ACCGGCGACG CGCAGGCCGC GGACGACGCG CGCCTCTTGC TGGAGGTGCT CACGCCCATT
GCCAAGAGCT GGCCCAGCGA GTGGTGCCTG GAAGCCAATT CGCTGGCCAT CCAGGTGCAT
GGCGGCTACG GCTACACGCG CGATTTTCCG GTGGAGCAGT ACTGGCGCGA CAACCGCCTG
AACATGATCC ACGAGGGCAC GCACGGCATC CAGGCAGCCG ACCTGCTGGG CCGCAAGGTG
CTGATGGAAA AGGGCCGCGG CCTGCAGCTG CTGGGCGGGC GCATCGCCGA GACCATCGGC
CACGCCGCCA AGGTGCCCGC GCTCGCGGCG CATGCCAGGG CGCTGGACGC CGCATGGCAG
CGCATCGTCA ACGCCACCCA GGCGGCCTGG TCCACCGGCG ATCCGGCCGA CGCGCTGGCC
AACGCCGTGC CCTACATGCA GGCCTTCGGC CACACCGTGC TGGCCTGGAT CTGGCTGGAC
GTGGCGCGGC GGGCGCTGGA GATCGATGCG GACAAGGCGA GGGCGGTAAC AGCTGGCAAG
ATAGGCGCCA CGGACTACTT CTTCCACTAC GAGCTGCCGA AAATCGGTGC CTGGCTCAAC
GTGGTCGAGA GCCGCGACCC TACCTGTACC GCATTGCCCG AGGACGCTTT TTGA
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| Protein sequence | MSLRPTLDFL LYDWLDAESL SQRERFSDHS RETFDAVLDT CERIAREKYA PANRIVDTQE
PHFDGEKVVL PQATHDAHKA FVESGMMSAA QDYDIGGMQL PYTLQAAANS FFAMASVSIG
SNMLTSGNAN LLMVHGTEMQ KEVFAKNEFS GRWAGTMCLS EPQAGSSLSD VATRAVPDGD
GYQGDPLGPR YRLTGNKMWI SAGDHELTEN IVHIVLAKIP DANGKLVPGT RGISLFIVPK
RMVNTQGELT GERNDVALAG LNHKLGWRGT TNTLLNFGEG KYPVGGKAGA VGYLVGEPGK
GLHCMFHMMN EARIGVGTAA TMLGMAGYYA SLDYAKTRPQ GRLVKKAEQP GTAVAKDSAS
PQVRIIEHAD VRRMLLAQKA YCEGALALEL YCARLVDEQK TGDAQAADDA RLLLEVLTPI
AKSWPSEWCL EANSLAIQVH GGYGYTRDFP VEQYWRDNRL NMIHEGTHGI QAADLLGRKV
LMEKGRGLQL LGGRIAETIG HAAKVPALAA HARALDAAWQ RIVNATQAAW STGDPADALA
NAVPYMQAFG HTVLAWIWLD VARRALEIDA DKARAVTAGK IGATDYFFHY ELPKIGAWLN
VVESRDPTCT ALPEDAF
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