| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2910 |
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| Symbol | |
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| ID | 7970799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3059509 |
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| End bp | 3060702 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793495 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002944796 |
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| Protein GI | 239815886 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.333909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATCG CTCTACTCGC CCTTACCGCC GGTGCCTTCG GAATAGGCAC CACCGAATTC
GTCATCATGG GCCTGCTGAT GCAGGTCTCA GCGGATCTGC ACGTCTCCAT CACGGCCGCC
GGCCTGCTGA TCTCGGGCTA TGCGCTCGGG GTGGCCGTGG GCGCGCCGAT CCTGACCATC
GCCACCCGCA AGCTGCCGCG CAAGACCGTG CTGCTCGCGC TGATGGCGAT CTTCACGCTC
GGCAACCTGG CCTGTGCGCT CGCGCCCAGC TACGAGCTGC TGATGGCCGC GCGCGTGGTC
ACCTCGCTCG CGCACGGCAC CTTCTTCGGC GTCGGCTCGG TGGTGGCCAC CGGACTCGTG
GCGCCGGAAC GGCGCGCCTC GGCCATCGCC ATCATGTTCA CCGGCCTCAC GGCCGCCACG
CTGCTGGGCG TGCCGGCCGG TGCCTGGCTC GGGCTGCAGT ACGGCTGGCG CGCCACCTTC
TGGGCGGTGA CGCTGATCGG CGTGCTGGCC TTTGCGGTGC TTGCTGTGTT CGTGCCCCGC
GTCAAGGGCG AAGCCAAGAC GGCGCCGCTG CGCGAGGAGC TCGCGGTGCT GGCGCGGCCG
CAGGTGCTGC TCGGCCTGGC GATGACGGTG CTGGGCTACG CGGGCGTGTT CGTGGTGTTC
ACCTACATCC AGCCCTTGCT GACGCAGGTC ACGGGCCTGT CCGAATCGGC GGTGTCGCCG
ATCCTGCTGG TGTTCGGCGG CGGCCTGGCC GTGGGCAACA TCCTCGGCGG CAGGCTGGCC
GACAGGTCGA CCATGCCGGC CGTGCTCGGC ACGCTGATGG CGCTGGCCGC GGTGCTCGGT
GCGATGCAGT TCACCATCGG AACGCCGTTC GCAGCGGTGG TGTTCGTGGG CCTGCTCGGC
ATCGCTTCGT TTGCCACCGT GGCGCCGATG CAGCTGCGCG TGCTCGAGAA GGCCTCGGGC
GCGGGCCAGA ACCTGGCGTC GAGCCTCAAC ATCGCGGCCT TCAACCTGGG CAATGCGCTC
GGCGCCTGGG TGGGCGGCGT GGTCATCGAC CATGGCCCGG GCCTGCGCGC GCTCGGCTGG
GTGGCCGCGC TGCTCACGCT CGCCGGGCTG GCGATCGCGC TCTGGAGCCG TGCGCTCGAC
CGGCGCGAAG GCGGCAATGC CGGGGCGGCC GATTGCGCGT CGGCCCGGGC CTGA
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| Protein sequence | MPIALLALTA GAFGIGTTEF VIMGLLMQVS ADLHVSITAA GLLISGYALG VAVGAPILTI
ATRKLPRKTV LLALMAIFTL GNLACALAPS YELLMAARVV TSLAHGTFFG VGSVVATGLV
APERRASAIA IMFTGLTAAT LLGVPAGAWL GLQYGWRATF WAVTLIGVLA FAVLAVFVPR
VKGEAKTAPL REELAVLARP QVLLGLAMTV LGYAGVFVVF TYIQPLLTQV TGLSESAVSP
ILLVFGGGLA VGNILGGRLA DRSTMPAVLG TLMALAAVLG AMQFTIGTPF AAVVFVGLLG
IASFATVAPM QLRVLEKASG AGQNLASSLN IAAFNLGNAL GAWVGGVVID HGPGLRALGW
VAALLTLAGL AIALWSRALD RREGGNAGAA DCASARA
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