| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2883 |
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| Symbol | |
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| ID | 7970772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3029676 |
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| End bp | 3030887 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793468 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002944769 |
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| Protein GI | 239815859 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0617503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA CCAACGCCCG CGTCATCGTC TGCAGCCCCG GCCGCAACTT CGTCACCCTC
AAGATCGAAA CCGACGAGGG CCTGACCGGC ATCGGCGATG CCACGCTCAA CGGGCGCGAA
CTCTCCGTGG CCGCCTACCT CACCGAGCAC GTCATCCCCT GCCTGATCGG ACGCGACGCG
CACCAGATCG AGGACATCTG GCAGTACCTC TACAAGGGCG CCTACTGGCG CCGCGGCCCG
GTCACCATGA CGGCGATTGC CGCGGTCGAC ACGGCCCTGT GGGACATCAA GGCCAAGGCC
GCCGGCCTGC CGCTGTACCA GCTGCTGGGT GGCAAGAGCC GTACCGGCGT GATGGTCTAC
GGCCATGCCA ACGGCAGCGA CATCGAGCAC ACGGTGGACG AGGTGCTGCG CTATGCGGAC
GCCGGCTACA AGGCCATCCG CGCGCAAAGC GGCGTGCCGG GGCTGGAGAA GGTCTACGGC
GTGGGCAAGG GCACGCTGTT CTACGAACCG GCCGATGCCG ACCTGCCCTC CGAGCACGAC
TGGTCCACCG AGAAGTACCT GCGCCACACG CCCAAGCTGT TCGAGCGCAT CCGCGAGAAG
CTGGGCTTCG AGCACCACCT GCTGCACGAC GTGCACCACC GCCTGACGCC GATCGAGGCC
GGGCGCCTGG GCAAGGCGCT GGAGCCCTAC AGCCTTTTCT GGATGGAAGA CGCGACGCCG
GCCGAGAACC AGGACGCCTT CCGCCTGATC CGCCAGCACA CCACCACGCC GCTGGCGGTG
GGCGAGATCT TCAACTCCAT CTGGGACTGC AAGGAGCTCA TCGAGAACCA GCTGATCGAC
TACGTGCGCG CCACCGTGGT CCATGCCGGC GGCATCACGC ACCTGCGCCG CATCGCCGAC
CTGGCCTCGC TCTACCAGGT GCGCACCGGC TGCCACGGCG CCACCGACCT GTCGCCGGTG
TGCATGGGTG CGGCGCTGCA CTTCGACCTG TGGGTGCCGA ACTTCGGCAT CCAGGAATAC
ATGCGCCACA CCGAAGAGAC CGACGCCGTG TTCCCGCACG CCTACACCTT CGACCAGGGC
ATGCTCTACC CGGGCGACGT GCCCGGCCAC GGCGTGGAAA TCGACGAGGC GCTGGCCGCG
AAGTACCCCT ACAAGCGCGC CTACCTGCCG GTGAACCGCC TGCAGCACGA CGGCACGCTG
TGGAACTGGT GA
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| Protein sequence | MKITNARVIV CSPGRNFVTL KIETDEGLTG IGDATLNGRE LSVAAYLTEH VIPCLIGRDA
HQIEDIWQYL YKGAYWRRGP VTMTAIAAVD TALWDIKAKA AGLPLYQLLG GKSRTGVMVY
GHANGSDIEH TVDEVLRYAD AGYKAIRAQS GVPGLEKVYG VGKGTLFYEP ADADLPSEHD
WSTEKYLRHT PKLFERIREK LGFEHHLLHD VHHRLTPIEA GRLGKALEPY SLFWMEDATP
AENQDAFRLI RQHTTTPLAV GEIFNSIWDC KELIENQLID YVRATVVHAG GITHLRRIAD
LASLYQVRTG CHGATDLSPV CMGAALHFDL WVPNFGIQEY MRHTEETDAV FPHAYTFDQG
MLYPGDVPGH GVEIDEALAA KYPYKRAYLP VNRLQHDGTL WNW
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