| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2871 |
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| Symbol | |
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| ID | 7970760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3018419 |
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| End bp | 3019336 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793456 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944757 |
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| Protein GI | 239815847 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.276028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTGC TGGCACAGAG CGCGTGGCCG AACAAGCCGA TCCGCATCAT CGTGCCCTAC
ACGCCGGGCG GGTTCACGGA CCAGATGGCG CGGCTGGTGC AGGTGGGCCT GCAGGCGCGG
CTCGGCCAGC CGGTGCTGGT CGACAACAAG CCCGGTGCCA ACAGCCTCAT CGGCGTCGAT
GCCATTGCCA AGGCACCGCC CGACGGCAGC ACCTTCGGCG TCGTGATCGC GGCCTATGCG
GCCAACACCA CGCTGTACCC CAAGCTGCCC TACGACCCGC AAAAGGACTT GGCGGGTGTT
TCGCTGATGG GCATCTCGCC GCTGCTGGCC GCGGTCAACA TCAATGCACC GTTCAAGACC
GCGCGCGAAC TCATCGACTA CGCGCGCGCC AATCCCGGCA AGGTGAGCTT CGGCTCGTCG
GGCAATGGCT CGGCCGCGCA CCTGACGACC GAGCTGTGGA AGTCGCTCAC GCAGACCTAC
ATGATCCACA TTCCGTACCG CGGCGCAGTG CCTGCGCTCA CGGACCTGAT GGGCGGCCAG
ATCCAGCTGT TCTTCGATGC ACCCACGGGC CTCATCAACC AGGCCAAGGC GGGCAAGGTG
CGGCTCATCG GCGTGGCGGG CGACAAGCGC CTGGCCGCTG CGCCCGATGT GCCGACCTTC
ATCGAGCAGG GCTTCGCGGG CTTCACCGGC AGCACCTGGG CCGGCATGCT GGCGCCGGCC
GGCACGCCGC GCGACATCGT CAAGCGCATG TCGGACGAGC TCGCGCGCAT CATCAAAAAC
GAAGAGACGC GCGCCAAGCT CGACGCCATG GGCACCATTC CGGCCGGCAG CACGCCCGAG
GAGTTCGATG CCTTCATCAA GGCAGAGACG GCCAAGTGGG GCAAAGTCAT CCGCACGGCG
GGCGTGAAGG CGGAATAA
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| Protein sequence | MPVLAQSAWP NKPIRIIVPY TPGGFTDQMA RLVQVGLQAR LGQPVLVDNK PGANSLIGVD
AIAKAPPDGS TFGVVIAAYA ANTTLYPKLP YDPQKDLAGV SLMGISPLLA AVNINAPFKT
ARELIDYARA NPGKVSFGSS GNGSAAHLTT ELWKSLTQTY MIHIPYRGAV PALTDLMGGQ
IQLFFDAPTG LINQAKAGKV RLIGVAGDKR LAAAPDVPTF IEQGFAGFTG STWAGMLAPA
GTPRDIVKRM SDELARIIKN EETRAKLDAM GTIPAGSTPE EFDAFIKAET AKWGKVIRTA
GVKAE
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