| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2830 |
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| Symbol | |
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| ID | 7971043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2975017 |
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| End bp | 2975601 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793415 |
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| Product | Hemerythrin HHE cation binding domain protein |
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| Protein accession | YP_002944716 |
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| Protein GI | 239815806 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3945] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.168396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCACG CCACCGTTCG CATCATTCGC CAGGAGCATG CGGCGCTTGC CGCCATGCTG
CGCTCCATCA TCATGCTGCT CGAACAGCAC CGCCGCAAGG GAACCCCGCC CGACTTCGCG
GCCTTGCGCG CCATGCTGTT CTACGTCGAC GAATTCCCGG AAAAGCGCCA CCACCGCAAG
GAGAGCGAGC TGCTGTTTCC CAAGCTGCGC GCCCGCACGC CGATCTCGCG CGAGCTGATG
GACCGGCTCG ACAACGACCA TGCCTGGGGC GAGCGGAAGA TCCGCAACGT GGAGCACGCG
ATGCTGGCCT TCGAGATGCT GGGCGACTCG CGGCGGGCCG CCTTCGAAAG CGCGATGGGG
CAGTACGTCG ACTTCTACCT GGACCACATG GCGATCGAGG AGCGCGAGAT CCTGCCGCTC
GCCGAAAAGG TGCTGACTGC CGAGGACTGG CGCGACCTGG ACGAGGCGTT CGGACGCAAC
CGCGATCCGC TCACCGGCTA CCGGCCAGAG CGGGAATACG AGGCGCTCTT CACCCGCATC
GTGAACATCG TGCCCGCGCC GATCGGGCTG GGCCCTGCGG CTTAG
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| Protein sequence | MTHATVRIIR QEHAALAAML RSIIMLLEQH RRKGTPPDFA ALRAMLFYVD EFPEKRHHRK
ESELLFPKLR ARTPISRELM DRLDNDHAWG ERKIRNVEHA MLAFEMLGDS RRAAFESAMG
QYVDFYLDHM AIEEREILPL AEKVLTAEDW RDLDEAFGRN RDPLTGYRPE REYEALFTRI
VNIVPAPIGL GPAA
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