| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2821 |
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| Symbol | |
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| ID | 7971034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2966440 |
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| End bp | 2967351 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793406 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_002944707 |
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| Protein GI | 239815797 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TCGTCAACAA CTTCTGGTCC AACTACGTTG CCGCGGGCGC GGTGCTGAGC
ATCCTTGGAT GCATGCTGCT GCTGTGGCTC ACGGCCCGCA AGCGCGTGCC TTCCGATGCG
GACAACACCA CCGGCCACGT GTGGGACGAG GACCTGCGCG AGTCCAACAA TCCGCTGCCC
ATGTGGTGGA TCGGCCTTTT CGTGCTGACC ATCTTCTTCG CGGTGGGCTA CCTGGTGGTC
TTTCCGGGGC TGGGCAGCTT CAGCGGCCAG GCGAACTGGA GCACCCGGAG CGAGTACGAA
GAGGACGTGG CCAAGGCCAA CGCGGCGCTG GCGCCCGTCT ACGCGAGCTA CGCCGGCATG
ACCATGGAAG ACATCGCCCG CGAACCCAAG GCCATGGCCA TCGGCGAGCG CCTGTTCATG
AACAACTGCT CCCAGTGCCA CGGCTCCGAT GCGCGCGGCA GCAAGGGCTT TCCCAACCTG
ACCGACAAGG ACTGGCTGCA CGGCGGCACG CCCGAGAAGA TCGCCGAGAC CATCACCAAG
GGCCGCATCG GCACGATGCC GCCAATGGCC GCGGCGGTGG GCACGCAGGA CGATGTGAAG
AACGTGGCGA ACTACGTGCT GAGCCTGTCG GGCGCGCCGC ACGACTCGGT GCGCGCCGGC
CTCGGCAAGT CAAAGTTCAC GGTGTGCGCC GCCTGCCACG GGATCGGCGG CGTGGGCAAC
CAGGCCGTGG GCGCGCCCAA CCTGAGCGAC AAGACCTGGC TGCATGGCTA CGGCGAGGCG
GCCATCGTGC AGATGGTCAA TGCCGGCAAG CACAGCGAGA TGCCCGCGCA GGAAGGCCGG
CTCACCGAGG CGCAGATCAA GCTGCTCGCG TCCTATGTGT GGGGACTTTC CAACCCTGCC
ACGGGGCCCT GA
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| Protein sequence | MSDFVNNFWS NYVAAGAVLS ILGCMLLLWL TARKRVPSDA DNTTGHVWDE DLRESNNPLP
MWWIGLFVLT IFFAVGYLVV FPGLGSFSGQ ANWSTRSEYE EDVAKANAAL APVYASYAGM
TMEDIAREPK AMAIGERLFM NNCSQCHGSD ARGSKGFPNL TDKDWLHGGT PEKIAETITK
GRIGTMPPMA AAVGTQDDVK NVANYVLSLS GAPHDSVRAG LGKSKFTVCA ACHGIGGVGN
QAVGAPNLSD KTWLHGYGEA AIVQMVNAGK HSEMPAQEGR LTEAQIKLLA SYVWGLSNPA
TGP
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