Gene Vapar_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2813 
Symbol 
ID7971026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2958802 
End bp2959851 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content68% 
IMG OID644793398 
Productaldo/keto reductase 
Protein accessionYP_002944699 
Protein GI239815789 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00980112 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACC GCAAATTCGG CCGCACCGGC CTGTTCGTTT CCGAACTCTG CCTCGGCACC 
ATGACCTTCG GCGGCGCGAG TGGCATCTGG GGCCAGATCG GCAACCTCCA GCAGTCCGAG
GCGGAAAGCC TGGTCGGCCG CGCGCTCGAC GCCGGCATCA ACTTCATCGA CACCGCGGAC
GTGTATTCCG AAGGGTTGTC GGAAACCATC ACCGGCCAGG CGCTGAAGAA CCTCAAGGTG
CCGCGCGAGA ACGTGGTGGT CGCCACCAAG GTGTTCGGCG AGACCGGCAA GACCGCCAAT
GCGGCCGGCG CCTCGCGCTA CCACATCATG GACGGCGTGA AGGCCAGCCT CAAGCGCCTG
CAGCTGGACC ACATCGACCT CTACCAGATC CACGGCTTCG ACCCGGTCAC GCCCATCGAG
GAAACCGTGC GCGCGCTGGA CAACCTGGTG CAGCAGGGCC ACGTGCGCTA CGTGGGCGTC
TCCAACTGGG CGGCCTGGCA GATCATGAAG GCGCTGGGCA TCGCCGAGCG CCAGGGGCTT
GCGCGCTTCG AATCGCTGCA GGCCTACTAC ACCATCGCGG GCCGCGACCT CGAGCGCGAA
CTGGCGCCGA TGCTGCAGAG CGAAAACCTC GGCCTGATGG TCTGGAGCCC GCTGGCGGGT
GGCCTCCTGA GCGGCAAGTA CGGCCGCGAC ACCGAAGCCG AGAAAGGCAG CCGCCGCACC
AGCTTCGACT TTCCGCCCGT GAACGTCGAG CGCGCCTACG ACTGCATCGA CGTGATGCGC
CAGCTGGCCG AAGCGCGCAA GGTGTCGGTG GCGCAGATCG CGCTCGCGTG GCTGCTGCAC
CAGCCGGTGG TGACCAGCGT GATCGTCGGC GCCAAGCGCG TCGCGCAACT CGACGACAAC
ATTGCCGCCA CCGCGATCCG GCTCTCCGCC GACGAGCTGG CTGCACTCGG CAAGGTGAGC
GCCCTGCCCT CCGAGTACCC GGGCTGGATG CTGGAGCGCC AGGGCGGCGC GCGGGCGAAG
CGACTGGCCG AATCAGGCCA GCGCGGCTGA
 
Protein sequence
MQYRKFGRTG LFVSELCLGT MTFGGASGIW GQIGNLQQSE AESLVGRALD AGINFIDTAD 
VYSEGLSETI TGQALKNLKV PRENVVVATK VFGETGKTAN AAGASRYHIM DGVKASLKRL
QLDHIDLYQI HGFDPVTPIE ETVRALDNLV QQGHVRYVGV SNWAAWQIMK ALGIAERQGL
ARFESLQAYY TIAGRDLERE LAPMLQSENL GLMVWSPLAG GLLSGKYGRD TEAEKGSRRT
SFDFPPVNVE RAYDCIDVMR QLAEARKVSV AQIALAWLLH QPVVTSVIVG AKRVAQLDDN
IAATAIRLSA DELAALGKVS ALPSEYPGWM LERQGGARAK RLAESGQRG