| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2784 |
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| Symbol | |
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| ID | 7970997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2930919 |
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| End bp | 2931824 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793371 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_002944672 |
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| Protein GI | 239815762 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.199172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTC CATCGAATCC CGCGCGCCGC CGCTTCTTCG CCGCGTCGCT CGTTGCGCTG
CCGCTGCCAG TGCTTGCGCA ATCCACCGCA CCACGGCCGC TGCGCGTCGT CGCGAGCTTC
TCGATCCTTG CCGACATGGC GCGCGAGATC GGCGGCAGCG CCGTCGAGGT TGCGGCCCTG
GTCGGTCCGG ACTCCGACGC GCACGTCTTC CAGCCGAGCC CGGCCGATGC GCGGCGCCTT
GCCAATGCAG AACTGGTCGT CGTCAACGGA CTGGCGTTCG AAGGCTGGAT GGACCGGCTG
GTGCGCTCAT CCGGCTACCG CGGTCCCGTC GTGGTGGCCA GCGATGGCGT GCCGGTGCGC
CGCATGGGCC GTGCGCCCGA TCCGCATGCA TGGCAGGACC TTGCGAACGC GCAGCGCTAT
GCCGCGAACC TGCGCGATGC GATGGCGCGG GCACGGCCGG CATTCGCGGC CGAGATCGGC
CGGCGCTGCG CGAGCTACAT CGAGCGGCTC CAGGCGCTCG ACCGCGAGAT TCGCGCACGT
TTCGACGCGA TGCCGCGCGA GCATCGCCGC GTGATCAGTT CGCACGATGC GTTCGGCTAT
TTCGGCGCGG CCTACGGCAT CGAGTTTCTT GCGCCGCAGG GCATGAACAC CGACAGCGAG
GCCTCCGCCG CCTCGGTCGC GCGCCTGATC GGCCAGATCC GGCGCGAGGA TGTGCGCGCG
GTGTTCGTCG AGAACATTTC CGATCCGCGC CTGGTACAGC GCATTGCACG CGAGGGCGGG
GTCACCGTCG GCGGCCGGCT CTATTCCGAC GCGCTGTCGG CGCCGGGGAC CGAGGCGGAC
ACCTACCTGA AGCTGTTCGC GCACAACGCC ACAACCATTG CCTCGGCGCT CTCGGCGAAG
CGCTGA
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| Protein sequence | MNFPSNPARR RFFAASLVAL PLPVLAQSTA PRPLRVVASF SILADMAREI GGSAVEVAAL
VGPDSDAHVF QPSPADARRL ANAELVVVNG LAFEGWMDRL VRSSGYRGPV VVASDGVPVR
RMGRAPDPHA WQDLANAQRY AANLRDAMAR ARPAFAAEIG RRCASYIERL QALDREIRAR
FDAMPREHRR VISSHDAFGY FGAAYGIEFL APQGMNTDSE ASAASVARLI GQIRREDVRA
VFVENISDPR LVQRIAREGG VTVGGRLYSD ALSAPGTEAD TYLKLFAHNA TTIASALSAK
R
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