Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2777 |
Symbol | |
ID | 7970990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2924537 |
End bp | 2925505 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793364 |
Product | hypothetical protein |
Protein accession | YP_002944665 |
Protein GI | 239815755 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.89737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTCA TGAAGCTGCT CGCCACCCCG GTGCTGTTGG CCGCAGTCGT CTTCGCTGTG CCGTCGCTCG CACAGACCTA CCCTGCCCGC CCGATCACGC TCGTTGTTCC GTATCCGCCG GGAGGCTCGG CCGACATCCT CGCGCGCACT GTCGGAGAGC AGCTGGCGGC GCGCCTCGGA CAGCCCGTGA TCGTGGAGAA CAAGGCCGGC GCCGGCACCG CCATCGGCGC ACGTTTCGTC GCAGACGCCA AGCCCGACGG CTACACCTTG CTCATGGGCA CCGTCAGTTC CCAGGCGATC AATCCGGCCA TGAGCAAGGT GGGCTACGAC CCGATCAAGG GCTTTGCAGT CGTCAGCGCA CTGGCATCGA TTCCCTTCGT GCTGGTGGCC CATCCCGCCG CTCCCTACAG CAATGTGGCG GAACTGATCG CAGCCGGCAG GAGCCGCCCC GGCACGATCA GCTTTGCGTC GGCCGGCCCC GGAACATCCA ACCACCTGGC GGGCGAGATG CTAGCGAACG CCGCGCATGT CCAGCTGCTG CACGTGCCGT ACCGCGGCAG TGCGCCAGCG CTTGCGGACG TGCTGGCCGG GCATGTCCCC GTGATGTTCG ACCTTCAGAC CACCGCCCTG CCCAACCTCA AGGCCCAGAA GGTCAAGGCG CTGGCCGTGA CAAGCCTGCA TCGCAGTCCG TTGCTACCCG ACGTGCCCAC AGTGGCGGAG AGTGGCTTGC CGGATTTCGA GGTCAGCGCC TGGTTCGGCA TATTTGCACC CGCCAAGGTC CCGCAGCCTG TACTCAAGCA GCTGTCCGAG GCGATGACCG ATGTCCTGCG GGCTCCCGCC ATGGTGCAGC GCCTGAGGGA AATCGGCACG GAGCCGGATA CCCGGAACGC CGCAGCGTTC GCCAGCTACG CGGCAGCGGA AGTCAGCAAA TACGCAGCCA TCGTGAAATC AGCTGGCCTC GCACCTTGA
|
Protein sequence | MKLMKLLATP VLLAAVVFAV PSLAQTYPAR PITLVVPYPP GGSADILART VGEQLAARLG QPVIVENKAG AGTAIGARFV ADAKPDGYTL LMGTVSSQAI NPAMSKVGYD PIKGFAVVSA LASIPFVLVA HPAAPYSNVA ELIAAGRSRP GTISFASAGP GTSNHLAGEM LANAAHVQLL HVPYRGSAPA LADVLAGHVP VMFDLQTTAL PNLKAQKVKA LAVTSLHRSP LLPDVPTVAE SGLPDFEVSA WFGIFAPAKV PQPVLKQLSE AMTDVLRAPA MVQRLREIGT EPDTRNAAAF ASYAAAEVSK YAAIVKSAGL AP
|
| |