Gene Vapar_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2777 
Symbol 
ID7970990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2924537 
End bp2925505 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID644793364 
Producthypothetical protein 
Protein accessionYP_002944665 
Protein GI239815755 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.89737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA TGAAGCTGCT CGCCACCCCG GTGCTGTTGG CCGCAGTCGT CTTCGCTGTG 
CCGTCGCTCG CACAGACCTA CCCTGCCCGC CCGATCACGC TCGTTGTTCC GTATCCGCCG
GGAGGCTCGG CCGACATCCT CGCGCGCACT GTCGGAGAGC AGCTGGCGGC GCGCCTCGGA
CAGCCCGTGA TCGTGGAGAA CAAGGCCGGC GCCGGCACCG CCATCGGCGC ACGTTTCGTC
GCAGACGCCA AGCCCGACGG CTACACCTTG CTCATGGGCA CCGTCAGTTC CCAGGCGATC
AATCCGGCCA TGAGCAAGGT GGGCTACGAC CCGATCAAGG GCTTTGCAGT CGTCAGCGCA
CTGGCATCGA TTCCCTTCGT GCTGGTGGCC CATCCCGCCG CTCCCTACAG CAATGTGGCG
GAACTGATCG CAGCCGGCAG GAGCCGCCCC GGCACGATCA GCTTTGCGTC GGCCGGCCCC
GGAACATCCA ACCACCTGGC GGGCGAGATG CTAGCGAACG CCGCGCATGT CCAGCTGCTG
CACGTGCCGT ACCGCGGCAG TGCGCCAGCG CTTGCGGACG TGCTGGCCGG GCATGTCCCC
GTGATGTTCG ACCTTCAGAC CACCGCCCTG CCCAACCTCA AGGCCCAGAA GGTCAAGGCG
CTGGCCGTGA CAAGCCTGCA TCGCAGTCCG TTGCTACCCG ACGTGCCCAC AGTGGCGGAG
AGTGGCTTGC CGGATTTCGA GGTCAGCGCC TGGTTCGGCA TATTTGCACC CGCCAAGGTC
CCGCAGCCTG TACTCAAGCA GCTGTCCGAG GCGATGACCG ATGTCCTGCG GGCTCCCGCC
ATGGTGCAGC GCCTGAGGGA AATCGGCACG GAGCCGGATA CCCGGAACGC CGCAGCGTTC
GCCAGCTACG CGGCAGCGGA AGTCAGCAAA TACGCAGCCA TCGTGAAATC AGCTGGCCTC
GCACCTTGA
 
Protein sequence
MKLMKLLATP VLLAAVVFAV PSLAQTYPAR PITLVVPYPP GGSADILART VGEQLAARLG 
QPVIVENKAG AGTAIGARFV ADAKPDGYTL LMGTVSSQAI NPAMSKVGYD PIKGFAVVSA
LASIPFVLVA HPAAPYSNVA ELIAAGRSRP GTISFASAGP GTSNHLAGEM LANAAHVQLL
HVPYRGSAPA LADVLAGHVP VMFDLQTTAL PNLKAQKVKA LAVTSLHRSP LLPDVPTVAE
SGLPDFEVSA WFGIFAPAKV PQPVLKQLSE AMTDVLRAPA MVQRLREIGT EPDTRNAAAF
ASYAAAEVSK YAAIVKSAGL AP